| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1740 |
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| Symbol | |
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| ID | 6287678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1833933 |
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| End bp | 1835612 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642625304 |
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| Product | integrase family protein |
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| Protein accession | YP_001899310 |
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| Protein GI | 187928823 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.407368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGG CCCCGACCGA TGCCTCCACG GCACTCCCCG ATGCCGCGTC CCTGGCCGCG
CTGCGTGCCT GGCATGCCGG CCTGAGCTCC CGGCAAGCCG TGGCGCAATA CCTGGGGGAG
GAGAGGGCGC GCGGCCAATC CTCGCGCGCC GTGCTGGGCC GCATTCGCCG CCGGCTTGCC
TTGCTGGCAC GCGAGCGCGG CCGCGACGAT CTGGCCGCGT TGTTCGAGAT GCCGGCGTCG
GCGCGGGTGG CGCAGGGCAG GGTGGCCGAC CGTGCTATCG AGGTCCTGCG CACGCTGCCG
ACGCCACAGC CAGCGATCAC CGACGACATC GGCCGCTGGC TACCGGCCCG CGCCGTCGCC
GCCCTGCGCG CCCACGGCAT CGAGACGCTG GCGGCGCTGA CGGTGCGCGT GCCCAGGCGC
CGACGCTGGT GGGCAGCCAT CCCGAGGCTG GGCGCGACCG GTGCCAGACA GATCGAGGCG
TTCTTCGCCG CGCATCCCGA GCTGACCGAG CGGGCCCGCG CGCTGATCGT GCAGGAGCGG
CGCAGCAGCG TCGTGCCGTG GGAGCAGCTA CGCTTGCCCC ATCAGGTCGA CGGCTCCGAA
GGGCGCTTTC GCGCCCCGCG CGCGACGTGC ACCTTGACCG CGGACAACGA CTACGAGGCG
GTGCAGGCCT GGCTGGCGCT GCACGAGTCA CCGGCTACTC ACCGCACCTA CCGCAAGGAA
GCGGAACGGC TGATCCTGTG GGCCATCGTC GAGCGTCAGC GGCCGCTGTC GTCGTTGACC
ACCGAAGACG CCGTGGCCTA CCGCGCCTTC CTGCGGCGTC CCATGCCACG AGAGCGGTGG
GTCGGGCCGC CACGCCCGCG CTCGTCGCCG GACTGGCGGC CGTTCACCGG TGCGCTGGCC
GCACGCTCGG TCGCCCATGC GCTGTCCATC CTTGGGGCGA TGTTCCGGTG GCTGGTCGAG
CAACGCTACG TGCTGGCCAA TCCCTTCGCC GGCATCAAGG TGCGCGGCGG CGGCCGCACC
GCGGCGCTGG ACAATTCGCG CGCCTTTACC GACGGTGAAT GGAAGTTGGT GCGGACCATT
GCCGACGGGC TCGAGTGGTC CTACGGTTGG GAGGCCGCCG CGGCGCAGCG CCTGCGCTTC
GTGCTGGATT TTGCCTATGC AACGGGGCTA CGTCCCAGCG AGCTGGTAGG AGCCACGCTC
GGGGATATCT GGACCGACGC GCAAGGCGAC GAATGGCTCG AGCTGACCGG CAAGGGCGGC
CGCAGCGGCA ACGTGGCAAT GCCCCCGTTG GCGCGGCGGG CGGTGGAGCG CTACCTGACG
GAACGCGGAC TGCCCATCAG TCGGCGTTTG TGGCGTCCCG AGGTCCGCCT GGTCGGTGAT
CTGGGCAGCG AGCCCGAGAT CGGCATCTCC AGCACGCGGC TATGGCATGT GGTGAAGCGG
TTCTTCAAGC TGGCTGCGGA TGTCATTGGT GCAGACCATC CCGCGGCGGC GGACAAGCTG
CGCCGCGCCA GTCCCCACTG GATGCGCCAT ACGCACGCCA CACACGCGCT AGGAAGCGGC
GCGGAACTGA CCATCGTTCG AGACAACCTG CGGCATGCGT CCGTGTCGAC GACGTCGATC
TACCTGCACA GCGACGAGGT AAAAAGGGCA AGGCAGATCG GAGAGGCATT TGGGGCGTAA
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| Protein sequence | MDTAPTDAST ALPDAASLAA LRAWHAGLSS RQAVAQYLGE ERARGQSSRA VLGRIRRRLA
LLARERGRDD LAALFEMPAS ARVAQGRVAD RAIEVLRTLP TPQPAITDDI GRWLPARAVA
ALRAHGIETL AALTVRVPRR RRWWAAIPRL GATGARQIEA FFAAHPELTE RARALIVQER
RSSVVPWEQL RLPHQVDGSE GRFRAPRATC TLTADNDYEA VQAWLALHES PATHRTYRKE
AERLILWAIV ERQRPLSSLT TEDAVAYRAF LRRPMPRERW VGPPRPRSSP DWRPFTGALA
ARSVAHALSI LGAMFRWLVE QRYVLANPFA GIKVRGGGRT AALDNSRAFT DGEWKLVRTI
ADGLEWSYGW EAAAAQRLRF VLDFAYATGL RPSELVGATL GDIWTDAQGD EWLELTGKGG
RSGNVAMPPL ARRAVERYLT ERGLPISRRL WRPEVRLVGD LGSEPEIGIS STRLWHVVKR
FFKLAADVIG ADHPAAADKL RRASPHWMRH THATHALGSG AELTIVRDNL RHASVSTTSI
YLHSDEVKRA RQIGEAFGA
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