Gene Rpic_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1603 
Symbol 
ID6288129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1692514 
End bp1693314 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content60% 
IMG OID642625167 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001899173 
Protein GI187928686 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.189565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAAA TGACGCATAG CATCCCTCGC GCGATGACAG AGCGGGCATG GCGCATTGCT 
GTAGTAGGCG CCGGCGGAAC GGGGAGTGCG GTTATCCCAA GTCTGGCGCG GCTCCATCAC
GCCATGCTCG AACTTGGCCA TCCCGGTGGT ATCGACTGTG TCGTCTATGA CGATGACACG
GTCAGTGAGA GCAACGTCGG CCGCCAGGGC TTCTATCCAG CGGATGTCGG TCGGCACAAG
GCTGCTCTTC TGGTCAATCG GTTGAATGTG CTCATGGGCA CCAACTGGCA GGCGGAAGTG
CAGCGTATCA ATGCCAATGA TCGGTTCTGC TGTGATTTGG TCGTTGGATG TGTGGATACG
AGGGCGGCGC GAAAGGCCAT CCTCAAGGCC ATGCAACGCG GCACGGGCGG CTACTATCTC
GATTGCGGCA ATGAGACCGA TCGTGGTCAA GTCATCCTTG GCCAAGTTCG CGGCCGGGCT
GAACATCGCC TACCTCACGT CGGCGACCTG TTTCCTGAGC TGATTGATCC GAAGCGCGAT
GCAAAGGACA CGGCGCCGTC TTGTTCGATG GAGGATGCGC TGCGCAAGCA GTCGCTGGTC
ATCAACCAGG CGATTGCAGT GCAAGCCTTC AATTTGCTTT GGACATTGTT CCGCACCGGG
ACGCTGCAGT ACAGCGGTGT GTTTGTAAAT CTCGAAGCGG GGCGCACGAG TCCGCTCCCG
GTAGACCCGG AGGCATGGGC GCGATTCGGG TACGTGCCGA GTATGCGCAA GGCGCAGAAG
CCGCCGCGAA TTGCTGCTTG A
 
Protein sequence
MTKMTHSIPR AMTERAWRIA VVGAGGTGSA VIPSLARLHH AMLELGHPGG IDCVVYDDDT 
VSESNVGRQG FYPADVGRHK AALLVNRLNV LMGTNWQAEV QRINANDRFC CDLVVGCVDT
RAARKAILKA MQRGTGGYYL DCGNETDRGQ VILGQVRGRA EHRLPHVGDL FPELIDPKRD
AKDTAPSCSM EDALRKQSLV INQAIAVQAF NLLWTLFRTG TLQYSGVFVN LEAGRTSPLP
VDPEAWARFG YVPSMRKAQK PPRIAA