Gene Rpic_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1521 
Symbol 
ID6289384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1613671 
End bp1614462 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID642625086 
Producthypothetical protein 
Protein accessionYP_001899092 
Protein GI187928605 
COG category 
COG ID 
TIGRFAM ID[TIGR02780] P-type conjugative transfer protein TrbJ 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA CCACATTCTC TGCAACTTTG CGAAAGATGC GCGGCACATT CGTCGTGGCC 
GCATCCGCCG TCGTGCTGTC GAGCCCCGCC CATGCCTCCG GCTGGCCGGT GTTCGATGCC
GCTAACTTCC TCAAGAACAC CATCAGCGCG GCGCAAGCGT TGAAGACCGA GGTGTACGAG
AACACCAACA TCATCTACCA GTACAAGATG ATGCTGAACC AGCTCCAGCA GGCTGTGGGC
CTTGATGACA TCAAGAACCA AGCGCAGATC GACTCGATCC TGGCGGACGT GAAGCGCTAC
TCGGACTACG GCCAAGTGCT CCAGCAGCTT TACGGGGCAG TCTCCAGCGA TGCGAGCTTC
TTGGACAAGG TGAACGGCCT GGTGGTGGTG TCCGGCAAGT CGCCCGCGCA ATGGTTCGAG
GACCAACGCA CGCTCCTGAC CTCTGGGAAT AAGACGGCGC AAGCCTTGTT CGATGCCGGC
ACCGACGTCG CCAAGAACAT CGCGCATCTG GCCCAACGTC GTCAGGACCT GCAGTCACAG
ATGACGCTGA GCCCGACGGC GCAGGCCACC GCCCAGACCA CCAATCAATA CCTGGACCTG
CTCTCCAGCC AGAACGCCGA CCTCATCAAG CTGATTGGCA CCAAGGTGCA GGCTGACGCC
GTGAAAGACC GGAAGGAGAA CGCCGACACG GAAGAAAAAA CGGCGGCCAT GCAGAGCGTG
ATCTCCAGCC AGGACGCTCA GCTCCAGAAG CTGCGCCAGT CCGTGTACAC GCGCAGCAGC
ACCGCCCAGT GA
 
Protein sequence
MLKTTFSATL RKMRGTFVVA ASAVVLSSPA HASGWPVFDA ANFLKNTISA AQALKTEVYE 
NTNIIYQYKM MLNQLQQAVG LDDIKNQAQI DSILADVKRY SDYGQVLQQL YGAVSSDASF
LDKVNGLVVV SGKSPAQWFE DQRTLLTSGN KTAQALFDAG TDVAKNIAHL AQRRQDLQSQ
MTLSPTAQAT AQTTNQYLDL LSSQNADLIK LIGTKVQADA VKDRKENADT EEKTAAMQSV
ISSQDAQLQK LRQSVYTRSS TAQ