| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1467 |
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| Symbol | |
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| ID | 6287869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1559132 |
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| End bp | 1560220 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642625032 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001899038 |
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| Protein GI | 187928551 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.765075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000331128 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGACCG ACGACGTGAT CGTCAGCTTT CGCGGTGTAC GCAAGACGTA TGACGGCGAG
ACCCTCGTGG TCAAGCACCT GGACCTGGAC ATCTACCAGG GCGAGTTCCT CACCCTGCTC
GGCCCCTCCG GCTCGGGCAA GACCACGTGC CTGATGATGC TGGCCGGGTT CGAATTCCCG
ACCGGCGGCG AAATCCGCCT CGAAGGTGCG CTGCTCAACA ACGTGCCGCC GCACAAGCGC
AACATCGGCA TGGTGTTCCA GAACTACGCG CTGTTCCCGC ACCTGACGGT GGCGCAGAAC
GTGGAATACC CGCTGACGGT GCGCAAGATC CCCGCCAGCG AGCGTGCAGA CCGCGTGCAC
AAGGCCCTGC AGATGGTCCG CATGGAAGGC TTTGCCAAGC GCTACCCCGC CCAGCTCTCC
GGCGGCCAGC AGCAGCGCAT TGCCCTGGCC CGCGCGCTGG TGTTCGAGCC CAAGCTCGTG
CTGATGGACG AGCCGCTCGG CGCGCTCGAC AAGCAACTGC GCGAACACAT GCAGTACGAG
CTGAAGTCGC TGCACGAAAA GCTCGGCGTG ACCTTCGTCT ACGTGACGCA CGACCAGGGC
GAGGCGCTCA CCATGTCCGA CCGCGTGGCC GTGTTCGACA AGGGCATCGT GCAGCAGCTC
GACACGGTGG ACAGCCTCTA CGAACGCCCC TGCAACGAGT TCGTCGCCAA CTTCATCGGC
GACAGCAACA CGCTGCGCGG CACCGTCACC CGTGTCGACG GCGACTACTG CGAACTGCAA
CTGAACGACG GCGCCCGCAT CATGGGCCGC AATATCGCCG GCGCCAATGT GGGGGCCGCC
GCCACCGGCT GCATCCGCCC GGAGCGCATG CGCCTGGCCG AAGGCGCCTC CGCCGCCTGC
AATGCGCTGA TGGGCCAGAC GCGCGGCCTC GTCTACTTTG GCGACCACGT GCGCATGCGC
TGCGCCCTGC CCGATCAGCC CGAATGTTTT GTGAAGGTGC CGCTGGGCAC GCGCGCGCTC
GAAGGCTTCG CGCCGGGCGC GCCCATCCAG CTTGAGTTCG CGCCTGAACA TCTGCGCGTT
TTTGCATGA
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| Protein sequence | MKTDDVIVSF RGVRKTYDGE TLVVKHLDLD IYQGEFLTLL GPSGSGKTTC LMMLAGFEFP
TGGEIRLEGA LLNNVPPHKR NIGMVFQNYA LFPHLTVAQN VEYPLTVRKI PASERADRVH
KALQMVRMEG FAKRYPAQLS GGQQQRIALA RALVFEPKLV LMDEPLGALD KQLREHMQYE
LKSLHEKLGV TFVYVTHDQG EALTMSDRVA VFDKGIVQQL DTVDSLYERP CNEFVANFIG
DSNTLRGTVT RVDGDYCELQ LNDGARIMGR NIAGANVGAA ATGCIRPERM RLAEGASAAC
NALMGQTRGL VYFGDHVRMR CALPDQPECF VKVPLGTRAL EGFAPGAPIQ LEFAPEHLRV
FA
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