Gene Rpic_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1374 
Symbol 
ID6286440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1472595 
End bp1473113 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID642624942 
Productputative lipoprotein transmembrane 
Protein accessionYP_001898948 
Protein GI187928461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.399659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.101597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGA TGCGTTGGCT GGCGGTAGCG ATTGTCGTGG CGGCGACGGC AGGATGTGCA 
GTATTGGAGT CCCCCGTCAC CAAGGGGCAG CGGCTGGTGG GTGCGGACGA GCCCGCCGTG
CAGGCGCAAT TCGGGCCGCC GCGCGAAACC TATCCGCTCG ATGGCGGCAC CCGCTGGCTC
TATCCGACCA AACCGTACGG GCAGTTCACC TACGCGGCCG ACTTTGATGC CGGCGGCAAG
CTCGTCGCCT TCAAGCAAGT CCTGAGCAGC CTCGAGTTTG CCCAGGCCAA GATCGGCGTC
TGGACCCGCG ATGACGTGCT GCGGCATTTC GGTCAGCCGG TCGAAACCGC GTATTTCCCA
CGCATGGACC GGCTGGTCTG GTCGTACCGC TTCAAGGCAG ACGACGTCTG GCCGTCGCTG
ATGCATTTCT ACTTCGACCC CGCCGGCGTC CTGCAACTGA CGCAGATTAC GCCCGACCCG
CTTTACGATC CGGACCGCCT CCGGCTGTTC CGCCGCTAG
 
Protein sequence
MRAMRWLAVA IVVAATAGCA VLESPVTKGQ RLVGADEPAV QAQFGPPRET YPLDGGTRWL 
YPTKPYGQFT YAADFDAGGK LVAFKQVLSS LEFAQAKIGV WTRDDVLRHF GQPVETAYFP
RMDRLVWSYR FKADDVWPSL MHFYFDPAGV LQLTQITPDP LYDPDRLRLF RR