| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1320 |
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| Symbol | |
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| ID | 6289177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1414277 |
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| End bp | 1414945 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624889 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001898895 |
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| Protein GI | 187928408 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0321525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.761807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGCAA CACGACTTTC AGCGGGACGT CATGCGGGCG TCGATAATGG GCGGATCGCC
AGCCCGGCGT TTGACGACCC TGCCGTGACC CAGCTCACTC TTCCCGGATT CGAAGCCACC
CCGCAATTGC CCGCGCATCG CCTGTTTCTG GCGATCAAGC CTGACGTGGA CACCGCCGAG
CGCATCGCGC GGCTGATCCA GCAATTGCGG CCCGTCGTGG GCTTCAAGGG CAAGGCGCTG
CGTACGGAGC GCCTGCATGT CACGCTGCAT CATCTGGGCG ATTTCGTTCA TCTGCCGCCT
GACGACGTCG TGGGGCGTGT GCGTGCAGCA GCGGCCGGCC TCGCGTTGCC GGCATTCGAT
GCCACGTTCA ACCAGGTGGT GAGCTTCCAT GGCCGGCGCG ATCATCGGCC GTTTGTGCTG
CTGGGCGATG AGGGCGTGGG CGGTTTGATG GCGTTTCAGG CGGCGCTGGG CGAGGCGCTC
CAGCATGCCG CCGTGCCGGT GCCGCGTGGG CATTTCAAGC CGCACATCAC GCTGTTGTAT
GACCGCGGTG GCTTTGCGCC GAAAGCGGTC GAGCCCATCA CGTGGACCGT GCGCGAGTTC
GTTCTCATCC ATAGCTGGCT AGGCAAAACG CGCTACGACG AACTCGGCCG CTGGGCGCTC
AAAGGCTGA
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| Protein sequence | MQATRLSAGR HAGVDNGRIA SPAFDDPAVT QLTLPGFEAT PQLPAHRLFL AIKPDVDTAE
RIARLIQQLR PVVGFKGKAL RTERLHVTLH HLGDFVHLPP DDVVGRVRAA AAGLALPAFD
ATFNQVVSFH GRRDHRPFVL LGDEGVGGLM AFQAALGEAL QHAAVPVPRG HFKPHITLLY
DRGGFAPKAV EPITWTVREF VLIHSWLGKT RYDELGRWAL KG
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