Gene Rpic_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1312 
Symbol 
ID6287315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1407058 
End bp1408278 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content68% 
IMG OID642624882 
Producthypothetical protein 
Protein accessionYP_001898888 
Protein GI187928401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0250798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.495238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAT TGATCACGGC TGCAGCGCGC GCACTCGCTG CCGGTGACCC ATTCGGAGCG 
CTGAACCGCG TCGCTCTGCG CGACGATGCC GCCGCGCTGG CTCTGCGTGG CATCGCCATG
GCCCAGCTCG GTGATCTGGC GCGCGCCAAG CTCCTGCTAC GTCGCGCGGC CCGCGCATTC
GGCTCTCGAG AGGCAGTGGC ACGCGCTCGC TGCATCGTTG CGGAAGCCGA AATCGCCCTC
GCCTCGCGCG ATCTTGGCTG GCCTGCCAAA ACCCTCGACA CGGCATGCGC CACGCTCGAG
GCGCACGGCG ACCACGTCAA TGCCGCACAC GCGCGGTATC TCAGCATCCG TCGCCTGCTG
CTGATCGGCC GTCTGGACGA CGCAGAAGCC GCGCTCGCCG CGCTAACGCC GGCGCATCTT
CCTCCGGTCT TGCGGGCGGC ACATGCGCTT GTCGTCGCCG GCATTGCCAT CCGACGTTTG
CAGACCGCTG CCGCACGGGC AGCCCTGAGC GATGCCGATC GCGCAGCACG CCAGGCCGGT
ATCCCGACGC TCAGCGCCGA AGTCGAACGC GCTGCCCTGG TCTTGAGCGC ACCTGCTGCG
CGGCTCATCT CCCGCGGCGA AGAGCGCGTG TTGCGCCTTG ATGATGTCGA GGCTCTCTTT
GCATCGGACG CGCTGGTGGT GGATGCGTGC CGGCTTGCCG TGAGGCAGGC CGATACAGTC
GTCTCGCTCG CCACGCGGCC CGTTCTGTTT ACGCTGGCAC GTGCACTTGC AGAGGCGTGG
CCGGAAGACG TGCCCAGAGA CGGCCTCATC GCGGGGGCAT TCCGCACCCG GCATCCCGAC
GAAACGCACC GCGTGCGCTT GCGCGTAGAG ATCGGGCGTT TGCGCACCGC GCTTGGTGCG
CTGGGCACGG TCAAAGCGAC GAAGCACGGA TTTGCACTGC AACCCCACGC GACGCAAGAC
GTCGTTGTTC TCGCACAGCC TGTCGACGAG CAATACGCCG CCGTGCTGGC GTGCCTCGCT
GATGGGGAAT CGTGGTCCAG CTCTGCATTG GCATTTGCGC TCGGGGCCAG CCAGCGCACC
GTACAGCGCG CGCTCGACGC GTTGGCAGCC GCCGGCAAGG TGCAGTTCTT CGGACGCGGG
CGCGCGCGCC GATGGGTGAC GCCGCCGGTA CCCGGATTCG CGACCACCTT GTTACTCCCC
GCACCGCTGC CAAGTGACTA G
 
Protein sequence
MDSLITAAAR ALAAGDPFGA LNRVALRDDA AALALRGIAM AQLGDLARAK LLLRRAARAF 
GSREAVARAR CIVAEAEIAL ASRDLGWPAK TLDTACATLE AHGDHVNAAH ARYLSIRRLL
LIGRLDDAEA ALAALTPAHL PPVLRAAHAL VVAGIAIRRL QTAAARAALS DADRAARQAG
IPTLSAEVER AALVLSAPAA RLISRGEERV LRLDDVEALF ASDALVVDAC RLAVRQADTV
VSLATRPVLF TLARALAEAW PEDVPRDGLI AGAFRTRHPD ETHRVRLRVE IGRLRTALGA
LGTVKATKHG FALQPHATQD VVVLAQPVDE QYAAVLACLA DGESWSSSAL AFALGASQRT
VQRALDALAA AGKVQFFGRG RARRWVTPPV PGFATTLLLP APLPSD