Gene Rpic_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1307 
Symbol 
ID6286582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1403250 
End bp1403828 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID642624877 
Productputative transmembrane protein 
Protein accessionYP_001898883 
Protein GI187928396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0447673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.727033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC TTTTGCGACT CGTTCTGTTT CTGGATGCGG CTGTCGCACT GTGCGTCGGT 
CTCGTCCTGC TGGCTTCACC GATGACGTCC ATCTTCGGCG CGCTGCAATT GCCGCAGCCG
GAACCGGCGA TGTACGGCCA GCTGCTCGGC GTCACGCTGA TTGGCGTGGC CTGGCTGCTG
TGGCACGCCA CCGTCAACGG GCAACTGACG ACCGCTGTGG CCCAGGTAGT CGGTCATCTG
AACCTGGCGG TCGCCGTGCT GGTGATTGTC TGGCTGCTGT TCTTCCACCT GCCGGTGGAG
GGCGCCGGCC GCATCTGGCT GCCGACGTTT GCGGCGGTGC TGGCGGCGTT TTCCGCAGTG
CAGATTCCCG CCTCGCGCCG TGTGCGCACC CATGAGCGCG TGCGCGCGCA GAAGGCCCGT
GAAGACGCCG CGGCCGCGCG CGAACGCGAA CGCGCAGAAA AGGCGCAACG CAAAGAACCT
GGCTACATGC CGCCTCCGGG CTACGGCCCC GGCACTGAAG TCGACACGAT TGCCGATTCC
ATTCCTCCAC AACATGCACG ACAAAGTCCT CATCCTTGA
 
Protein sequence
MKALLRLVLF LDAAVALCVG LVLLASPMTS IFGALQLPQP EPAMYGQLLG VTLIGVAWLL 
WHATVNGQLT TAVAQVVGHL NLAVAVLVIV WLLFFHLPVE GAGRIWLPTF AAVLAAFSAV
QIPASRRVRT HERVRAQKAR EDAAAARERE RAEKAQRKEP GYMPPPGYGP GTEVDTIADS
IPPQHARQSP HP