Gene Rpic_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1221 
Symbol 
ID6287799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1309464 
End bp1310378 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID642624791 
Productsulfate ABC transporter, inner membrane subunit CysT 
Protein accessionYP_001898797 
Protein GI187928310 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.53795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.19728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC CTTCCGCGTT TTTTTCGTCC AAGCGGCGTA AGCCCGCCAA CGTGCTGCCC 
GGCTTCGGGC TGGCGCTGGG CTTTTCGCTT CTGTACCTCG CGCTGATCGT CCTGATCCCG
CTGTCGGCAA CCGTCCTCAA GACGTTCACC ATGACGTGGG ATGCGTTCTG GACCACCGTC
ACCGCGCCGC GCGTGGTGGC GTCGTACAAG CTGACCTTTG GCGCCTCGCT GATCGCTGCG
GTGATCAACC TCGTGTTCGG GCTGATCGTG GCGTGGGTGC TGGTGCGCTA TCGCTTTCCG
GGCAAGCGGT TGATCGACGC GCTGGTGGAT CTGCCTTTTG CGCTGCCGAC GGCCGTGGCT
GGTATCGCGC TCACCGCGTT GTATGCGCCG AATGGCTGGA TCGGCTCGCG GCTGGAGCCG
CTGGGGCTGA AGGTGGCGTT CACGCCGCTG GGCATCGTGG TGGCGCTCAC GTTCATCGGC
TTGCCGTTTG TCGTGCGCAC GGTGCAGCCG GTGCTGGAAG ATCTGGAGAC CGAACTGGAA
GAGGCGGCTG CCAGCCTGGG TGCCACGCGC TGGCAGACCT TCATTCGCGT GATCCTGCCG
ACCTTGCTGC CTGCATTGCT GACCGGTTTC GCGCTGGCGT TTGCGCGGGC CACGGGCGAG
TACGGCTCGG TCATCTTCAT CGCCGGCAAC ATGCCGATGG TCTCCGAGAT CACGCCGCTG
ATGATCTATT CCAAGCTGGA GCAGTTCGAC TACGCGGGCG CCACGGCCAT TGCCGTCGTC
ATGCTCGGCA TCTCGTTCAC GCTGTTGCTG GTGATCAACC TGCTGCAGGC CTGGACGCGC
CGCCGCGGCA ATCGCAACGA CACCATCGAG CGCGCCCCTG AACCTTCGAC CGCCCACGCG
GCAGCTGGAG CCTGA
 
Protein sequence
MSLPSAFFSS KRRKPANVLP GFGLALGFSL LYLALIVLIP LSATVLKTFT MTWDAFWTTV 
TAPRVVASYK LTFGASLIAA VINLVFGLIV AWVLVRYRFP GKRLIDALVD LPFALPTAVA
GIALTALYAP NGWIGSRLEP LGLKVAFTPL GIVVALTFIG LPFVVRTVQP VLEDLETELE
EAAASLGATR WQTFIRVILP TLLPALLTGF ALAFARATGE YGSVIFIAGN MPMVSEITPL
MIYSKLEQFD YAGATAIAVV MLGISFTLLL VINLLQAWTR RRGNRNDTIE RAPEPSTAHA
AAGA