Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1220 |
Symbol | |
ID | 6287798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1308672 |
End bp | 1309346 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642624790 |
Product | protein of unknown function DUF1234 |
Protein accession | YP_001898796 |
Protein GI | 187928309 |
COG category | [R] General function prediction only |
COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.389413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.138003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA GCGCACCCGC AACCGCATCG GACGCACCCG CCTGGCAGTG GCCGGCAGAC GCCGTCATCC TGACCGTTCC CGGCTTGCAT GGCAGCGGCC CTGGCCACTG GCAGACGCGC TGGGAGCAGC GCTTTCCGGC GTGGCGGCGC GTGGTGCAGA CGGATTGGTC AACGCCGGAC CTGCCACGCT GGTCTGCCCG TGTGGGCGAA GCGGTGCATG CGGCGGTTGC CGAGCGTGCG CCAACCCGCA GCAGGCGCCC TGTGATTCTG GTGGCGCATA GCTTCGGCTG CCTGGCGTCG CTGCACTGGG CGGCTCAGAC CAAGGAGGCC GTGGCTGCGG TGCTGCTCGT CGCGCCGGCC GATCCGGACA AATTCGGTGT GCGGGATCTG CTCCCGGCGC GCGCCTTGCC GTTCCCGGCC ACGCTGGTCG CCAGTCGCAA CGACCCCTGG ATGCCGCAAG GCAACGCCAT CGACTGGAGC GCGCGCTGGG GCGCCGAATT CATTGACGCA GGCGAGGCGG GCCATATCAA CGCCGATTCC AACCTCGGCG AATGGGAAGC CGGCCTGGTC TTGCTCGACC GCCTGATCGG CCGCGCAAGT GCGCAAGACA CCACGCGCGA TGGCGCCGAC TGGCAGGCGC AGTGGGATGT CTTACCGAGC ACCCCTTATA TCTAA
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Protein sequence | MARSAPATAS DAPAWQWPAD AVILTVPGLH GSGPGHWQTR WEQRFPAWRR VVQTDWSTPD LPRWSARVGE AVHAAVAERA PTRSRRPVIL VAHSFGCLAS LHWAAQTKEA VAAVLLVAPA DPDKFGVRDL LPARALPFPA TLVASRNDPW MPQGNAIDWS ARWGAEFIDA GEAGHINADS NLGEWEAGLV LLDRLIGRAS AQDTTRDGAD WQAQWDVLPS TPYI
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