Gene Rpic_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1220 
Symbol 
ID6287798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1308672 
End bp1309346 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID642624790 
Productprotein of unknown function DUF1234 
Protein accessionYP_001898796 
Protein GI187928309 
COG category[R] General function prediction only 
COG ID[COG3545] Predicted esterase of the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.389413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.138003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA GCGCACCCGC AACCGCATCG GACGCACCCG CCTGGCAGTG GCCGGCAGAC 
GCCGTCATCC TGACCGTTCC CGGCTTGCAT GGCAGCGGCC CTGGCCACTG GCAGACGCGC
TGGGAGCAGC GCTTTCCGGC GTGGCGGCGC GTGGTGCAGA CGGATTGGTC AACGCCGGAC
CTGCCACGCT GGTCTGCCCG TGTGGGCGAA GCGGTGCATG CGGCGGTTGC CGAGCGTGCG
CCAACCCGCA GCAGGCGCCC TGTGATTCTG GTGGCGCATA GCTTCGGCTG CCTGGCGTCG
CTGCACTGGG CGGCTCAGAC CAAGGAGGCC GTGGCTGCGG TGCTGCTCGT CGCGCCGGCC
GATCCGGACA AATTCGGTGT GCGGGATCTG CTCCCGGCGC GCGCCTTGCC GTTCCCGGCC
ACGCTGGTCG CCAGTCGCAA CGACCCCTGG ATGCCGCAAG GCAACGCCAT CGACTGGAGC
GCGCGCTGGG GCGCCGAATT CATTGACGCA GGCGAGGCGG GCCATATCAA CGCCGATTCC
AACCTCGGCG AATGGGAAGC CGGCCTGGTC TTGCTCGACC GCCTGATCGG CCGCGCAAGT
GCGCAAGACA CCACGCGCGA TGGCGCCGAC TGGCAGGCGC AGTGGGATGT CTTACCGAGC
ACCCCTTATA TCTAA
 
Protein sequence
MARSAPATAS DAPAWQWPAD AVILTVPGLH GSGPGHWQTR WEQRFPAWRR VVQTDWSTPD 
LPRWSARVGE AVHAAVAERA PTRSRRPVIL VAHSFGCLAS LHWAAQTKEA VAAVLLVAPA
DPDKFGVRDL LPARALPFPA TLVASRNDPW MPQGNAIDWS ARWGAEFIDA GEAGHINADS
NLGEWEAGLV LLDRLIGRAS AQDTTRDGAD WQAQWDVLPS TPYI