Gene Rpic_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1177 
Symbol 
ID6288005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1267101 
End bp1267412 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID642624747 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001898753 
Protein GI187928266 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.886024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.414565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA TCCGCGCCAA GTCGTTCACC GCCGAGCGTG CCTGGGGCGC GCTCGATATT 
GCCAATATGA GTGGCATTAC CACGCGCCTG CATTGGACGG ACCAGCCTTA CCGCTGGCAT
GTGAACGACG GTGAGGAGGT GTTCGTGGTG CTCGACGGTA CGGTCGACAT GCATTACCGC
GAAGCCGGCG AGGAGAAAGT CGCGACGCTG GAACCCGGCG ATATCTTCTT CGCCGGTATC
GGCTGCGAGC ATGTGGCGCA CCCGCGGGGC GAGGCGCGAA TCCTCGTCGT CGAGAAAGCG
GGGAGCGTTT AG
 
Protein sequence
MNIIRAKSFT AERAWGALDI ANMSGITTRL HWTDQPYRWH VNDGEEVFVV LDGTVDMHYR 
EAGEEKVATL EPGDIFFAGI GCEHVAHPRG EARILVVEKA GSV