| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1051 |
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| Symbol | |
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| ID | 6289097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1116794 |
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| End bp | 1117930 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642624623 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_001898631 |
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| Protein GI | 187928144 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.230848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCC AGAAAGCCGC CACGCCCGTC ACCCCAGCCG ATGACAACAT CGACGCTGCT
GTAGAGGGCC AGCGCACCCC AAACGGGCGC GCTGGGCGGC GTGCGCGCGG TGCGGCGCAG
CCTCCTGCTG AAGAGATCGA AGTCGTCGAT GCGCTTGTCG ACGACCTCCC TGTTGCCGAT
TCCGCCGATC TGAACGACAC GTCCGACAGT GCTGACGAGT CGGACGAAGA AGAGGAGGAG
GGCGAAGAGG CCGAGGAGGC TGCACCCGAG GAAGATTTCC GCAAGGTGCT GCAGGCCGAG
CTGGCCGCCG ACACTGTTCA GCACTATCTC AATCGCATCA GCATCAAGCC GCTCCTGACG
CCAGCGGAAG AGCTGCATTT CTCGACGCTG GCCAAGGCGG GCGAATTTGC CGCGCGTCAG
GTCATGATCG AGCGCAACCT CCGCCTGGTC GTGAGTATCG CCAAAGGTTA TCTGAACCGC
GGTGTGCCGC TGCTCGATCT GATCGAGGAG GGCAACCTGG GTCTGATGCA CGCGATCGAA
AAGTTCGATC CGGAACGCGG GTTCCGCTTC TCGACGTATG CAACGTGGTG GATCCGCCAA
AGCATCGAGC GCGCGATCAT GAATCAGGCG CGCACCGTCC GTTTGCCGGT GCATGTGATT
CGCGAGCTCA ATCAGGTGCT GCGCGCTAAG CGCCATCTGG AAAAGAGCGG CGTGGATGGC
CGAGACGCGA GCCTTGAAGA CATCGCCCAC CTGCTTGGCA AGACCACGGA AGAAGTGCAG
GACGTGCTCT CGCTCAACGA GCACACGACT TCGCTGGATA CGCCGTTTGA TCTTGATCCG
GGCACGAGCC TGCTCGACTT CCTATCGGAC GAGCATGGCG CATCGCCGGA TCAGGAAGTG
GCCCATCGCG AGCTGTCGCA GTTGATGAAG TCGTGGCTCG CACGCTTGTC CGACAAGCAT
CGCTATGTGG TCGAGCGCCG CTTTGGCCTC AACTACATCG AGCCTGCAAC GCTGGAAGAA
CTGGCCGCCG AGATGGGTTT GACGCGCGAA CGCGTGCGGC AGATCCAGCA GGAGGCGCTG
GTCAAGCTAA AGCGTCATTT CGCCTCTCAG GGCGTACGCA AAGACGCGGT GCTGTAA
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| Protein sequence | MPRQKAATPV TPADDNIDAA VEGQRTPNGR AGRRARGAAQ PPAEEIEVVD ALVDDLPVAD
SADLNDTSDS ADESDEEEEE GEEAEEAAPE EDFRKVLQAE LAADTVQHYL NRISIKPLLT
PAEELHFSTL AKAGEFAARQ VMIERNLRLV VSIAKGYLNR GVPLLDLIEE GNLGLMHAIE
KFDPERGFRF STYATWWIRQ SIERAIMNQA RTVRLPVHVI RELNQVLRAK RHLEKSGVDG
RDASLEDIAH LLGKTTEEVQ DVLSLNEHTT SLDTPFDLDP GTSLLDFLSD EHGASPDQEV
AHRELSQLMK SWLARLSDKH RYVVERRFGL NYIEPATLEE LAAEMGLTRE RVRQIQQEAL
VKLKRHFASQ GVRKDAVL
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