Gene Rpic_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1046 
Symbol 
ID6287516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1111874 
End bp1112980 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content64% 
IMG OID642624618 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001898626 
Protein GI187928139 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.758573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAC AACTGCTGTC CCCGGTTCAG ACCGGCCGTA CGACCCTCGC GAATCGTGTC 
GTCATGGCGC CGCTTACGCG CTCGCGCGCC GGCCAGCCGG GTGATGTGCC GACCGAATTG
AACGTGACCT ATTACGCGCA GCGCGCAACC GCTGGTTTGA TTGTCACGGA AGCCACGCAA
ATTTCCCGCC AGGGCCAGGG CTACGCCTGG ACGCCGGGCA TGTACACCGA TGCACAGGAA
GCCGGCTGGA AGACCGTGGT GGATGCTGTG CACGCCAAGG GTGGCCGCAT CTCGCAACAG
CTTTGGCACG TGGGCCGCAT CTCCAACACG CTGCTGCAGG AAAACGGTCA GGCTCCCGTC
GCGCCGTCAG CCATCGTCGC CAAGGGCGCG CAGAGCTTTG TCGTGCAGCC CGACGGCACG
CCCGCCAATG TGCCGACCAG CGAGCCACGT GCCCTGGCCA CGGAAGAAAT CCCCGGTGTG
ATCGCGCAAT ACCGCCAGGC CGTGCTGCGC GCGCGCCGCG CCGGTTTCGA TTTCGTTGAA
ATCCACGCCG CCAACGGTTA TCTGCTGCAC CAATTCCTGT CGACCAACAG CAACCAGCGC
ACCGACCAGT ACGGCGGCTC TCTGGAGAAC CGCGCCCGAC TGATTCTCGA AGTCGTTGAC
ACTGCCATCG ACGAGATTGG TGCAGATCGC GTCGGCATTC GCCTGTCGCC GCACTTCGTC
GCGCATGACA TTGCCGACGC ACAAGCCGAA GAAAGCGCGT TGTACCTCGC CCGCGAGCTG
ACCAAGCGTG GCATCGCCTA CCTGCACATC GCCGAGCCGG ATTGGGCCGG CGGTCCCGAG
TTGACCAACG ATTTCCGTCG TCAACTGCGC GACGCCTTCA AGGGCACGCT CATCGTGTGC
GGCCAATACA CGGCGGAAGA GGGCGAGCAA ATGATTGCCT CCGGTCTGGC CGATGCCGTG
GCGTTCGGAC GCCCGTTCAT CGCCAACCCC GACCTGGTGG CGCGCTTCCG TGCCGGCGCA
TCGCTCAACA AGCCGGATCG CGAAACGTTC TACGGCGGCC AGGAAAAGGG CTACACCGAC
TATCCGACGC TGGAGGAGGC GGCCTGA
 
Protein sequence
MTQQLLSPVQ TGRTTLANRV VMAPLTRSRA GQPGDVPTEL NVTYYAQRAT AGLIVTEATQ 
ISRQGQGYAW TPGMYTDAQE AGWKTVVDAV HAKGGRISQQ LWHVGRISNT LLQENGQAPV
APSAIVAKGA QSFVVQPDGT PANVPTSEPR ALATEEIPGV IAQYRQAVLR ARRAGFDFVE
IHAANGYLLH QFLSTNSNQR TDQYGGSLEN RARLILEVVD TAIDEIGADR VGIRLSPHFV
AHDIADAQAE ESALYLAREL TKRGIAYLHI AEPDWAGGPE LTNDFRRQLR DAFKGTLIVC
GQYTAEEGEQ MIASGLADAV AFGRPFIANP DLVARFRAGA SLNKPDRETF YGGQEKGYTD
YPTLEEAA