| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0985 |
|---|
| Symbol | |
|---|
| ID | 6286782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1040373 |
|---|
| End bp | 1041575 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642624553 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_001898565 |
|---|
| Protein GI | 187928078 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.103287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCCTG ACCGCGTTCT CTCTGGCATG CGTCCGACCG GTGCTCTGCA CCTGGGGCAT
TACCACGGCG TCCTGAAAAA CTGGGTCCGG CTGCAAGCCG AATACCCGTG CTTCTTCTTC
GTCGCCGACT GGCATGCGCT GACCACGCAC TACGAGTCGC CCGAGGTGAT CGAGGAATCG
GTGTGGGAAA TGCTGATCGA CTGGCTCGCT GCCGGTGTCG ATCCGACGCA GTCCACGCTG
TTCATCCAGA GCCGTGTGCC CGAGCACGCG GAGCTGTTCC TACTGCTCTC GATGGGCACG
CCGCTGGGCT GGCTCGAACG CGTGCCGACA TACAAGGACC AAATCGAGAA GCTCAAGGAG
AAGGACCTCT CCACCTACGG CTTCCTCGGT TACCCGCTGC TGCAAGCCGC CGACATCCTG
ATCTACCGCG CCGGCTTCGT GCCGGTGGGC GAAGACCAGG TGCCGCACGT CGAGATGACG
CGCGAAGTCG CCCGCCGCTT CAACTACCTC TATGGCCGCG AACCAGGTTT CGAAGAGAAG
GCGCTGGAAG CGGCCAAGAA GCTCGGGGGC AAGCGCGCCA AGCTGTATCT GGAGCTGCGC
ACTGCCTACC AGGAGCGTGG TGAAGACGAG GCCCTGGAGC AGGCCCGCGC GCTGCTGGCC
GAATCGCAGA GCCTGTCCAT GGGCGACCGC GAACGCCTGT TCGGCTATCT GGAAGGCGCC
CGCAAGATCA TCCTGCCCGA ACCGCAGGTG CTGCTGACCG AGGCATCGCG CATGCCGGGT
CTTGATGGCC AGAAGATGTC CAAGTCGTAC GGCAACACGA TCCGCATGCG CGAGGACAAG
GAAACCGTCG AGAAAAAGGT TCGCACCATG CCGACCGATC CGGCTCGCGT GCGCCGCACC
GATCCGGGCG ACCCGGACAA GTGCCCGGTC TGGCAGTTGC ATCAGGTCTA CTCTGATGCC
GACACGAAAG AGTGGGTGCA AAAGGGTTGC CGCAGCGCCG GCATTGGCTG CCTGGAGTGC
AAGCAGCCCG TGATCGAGGG CATCCTGCGG GAGCAGCAGC CGATGCTTGA GCGCGCCCAG
AAATACATCG ACGATCCGTC ACTGCTGCGC GCCATCATTG CTGATGGCTG CGACAACGCC
CGCAAGGTTA CGCAGGAGAC CATGCGCGAG GTGCGCGAGG CGATGGGTCT GTCGTACAGC
TGA
|
|---|
| Protein sequence | MFPDRVLSGM RPTGALHLGH YHGVLKNWVR LQAEYPCFFF VADWHALTTH YESPEVIEES
VWEMLIDWLA AGVDPTQSTL FIQSRVPEHA ELFLLLSMGT PLGWLERVPT YKDQIEKLKE
KDLSTYGFLG YPLLQAADIL IYRAGFVPVG EDQVPHVEMT REVARRFNYL YGREPGFEEK
ALEAAKKLGG KRAKLYLELR TAYQERGEDE ALEQARALLA ESQSLSMGDR ERLFGYLEGA
RKIILPEPQV LLTEASRMPG LDGQKMSKSY GNTIRMREDK ETVEKKVRTM PTDPARVRRT
DPGDPDKCPV WQLHQVYSDA DTKEWVQKGC RSAGIGCLEC KQPVIEGILR EQQPMLERAQ
KYIDDPSLLR AIIADGCDNA RKVTQETMRE VREAMGLSYS
|
|---|
| |