| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0899 |
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| Symbol | |
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| ID | 6287451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 952386 |
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| End bp | 953387 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624463 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001898481 |
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| Protein GI | 187927994 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.600905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.032532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCG GAATCCTTGT CACCCGCGCG ATGTTTCCCG AAGTGCTTGA GCGCTTGCGC
GAGACCTTCG ACGTGATCGA CAACCAAGCG GACTTCGACT ATCCGCCCGA AGCGCTGGCG
GAGCGTCTGC AAGGTCGCGT GGGCCTGCTG TCGAACGCTG CCGACACCAT CAACGCCGAG
CTGATCAGCC GCGTGCCCAC GCTGCGAGCG GTGTGCAACA TGGCCGTCGG CTATAACAAC
TTTGATCTCG CGGCGATGAC GCGTGCGGGC ATCCTGGCCA CTAACACGCC CGACATCCTG
ACCGAGACCA CCGCCGATTT CGGCTGGGCC TTGCTGATGG CCGCTGCACG CCGCGTGTCC
GAATCCGAAC GCTGGCTGCG TTCCGGGCAA TGGAAGCGCT GGACCTACGA TACGTTCCTC
GGCGCAGAGG TGTATGGCAG CACGCTGGGC ATTCTCGGCA TGGGCCGCAT CGGCCAGGCG
CTGGCGCGGC GTGCGAGCGG TTTCTCCATG CGCGTGATCT ATCACAACCG CAGCCGGCTT
TCGCCCGAAG TCGAGCGCGA CACGCGCGCC ACTTACGTCA GCAAGGACGA CTTGCTGAAG
CAGGCTGATC ACCTCGTGCT GGTGCTGCCG TATTCCAAGG AAAGCCACCA CGCCATCGGT
GCAGCTGAGC TGGCACAGAT GAAGCCGACC GCCACGCTGG TCAATCTCGC GCGCGGCGGC
ATCGTGGATG ACGCAGCGTT GGCGCAGGCG CTGGCGGACA AGCGCATCTT TGCCGCCGGC
CTGGACGTCT ACGAGGGTGA GCCGAAGGTA CATCCGGCGC TGCTGGAGGC CGAGCACGTT
GCGCTCACTC CGCACATTGC CAGTGCCACT TTCGGCACGC GCCTGGGCAT GGCCAACCTG
GCAGCCGACA ACCTGATCGC TGCGCTGGGC TTTGGCCCCC GCGCGGGGCA GCCGCCCAAC
TTGTTGAACC CGGATGCGCT GGCGCAGCGC GCGTCCTCCT GA
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| Protein sequence | MKPGILVTRA MFPEVLERLR ETFDVIDNQA DFDYPPEALA ERLQGRVGLL SNAADTINAE
LISRVPTLRA VCNMAVGYNN FDLAAMTRAG ILATNTPDIL TETTADFGWA LLMAAARRVS
ESERWLRSGQ WKRWTYDTFL GAEVYGSTLG ILGMGRIGQA LARRASGFSM RVIYHNRSRL
SPEVERDTRA TYVSKDDLLK QADHLVLVLP YSKESHHAIG AAELAQMKPT ATLVNLARGG
IVDDAALAQA LADKRIFAAG LDVYEGEPKV HPALLEAEHV ALTPHIASAT FGTRLGMANL
AADNLIAALG FGPRAGQPPN LLNPDALAQR ASS
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