Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0885 |
Symbol | |
ID | 6289062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 940045 |
End bp | 940446 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642624449 |
Product | scaffold protein |
Protein accession | YP_001898467 |
Protein GI | 187927980 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.541754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.110729 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTACA GCAACCAAGT TCTGGACCAT TACGAAAACC CGCGCAACGT CGGTTCGTTC GAGAAGGGCG ACGACACGGT CGGCACCGGC ATGGTCGGCG CGCCGGCTTG CGGCGACGTG ATGAAGCTGC AGATCAAGGT CAACGAGCAG GGCGTGATTG AAGACGCCAA GTTCAAGACC TACGGCTGCG GTTCGGCCAT CGCTTCGTCG TCGCTGGTGA CGGAATGGGT GAAGGGCAAG ACGCTGGATC AGGCGCTGGA AATCCGCAAC ACGGCCATCG CTGAAGAGCT GGCCCTGCCG CCGGTGAAGA TCCACTGCTC GATTCTGGCC GAAGACGCCA TCAAGGCGGC CGTGGCCGAC TACAAGGAAA AGCACGGTTC GGCCGAGCAG AAGGCTGCTT GA
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Protein sequence | MSYSNQVLDH YENPRNVGSF EKGDDTVGTG MVGAPACGDV MKLQIKVNEQ GVIEDAKFKT YGCGSAIASS SLVTEWVKGK TLDQALEIRN TAIAEELALP PVKIHCSILA EDAIKAAVAD YKEKHGSAEQ KAA
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