Gene Rpic_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0885 
Symbol 
ID6289062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp940045 
End bp940446 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content61% 
IMG OID642624449 
Productscaffold protein 
Protein accessionYP_001898467 
Protein GI187927980 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.541754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.110729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTACA GCAACCAAGT TCTGGACCAT TACGAAAACC CGCGCAACGT CGGTTCGTTC 
GAGAAGGGCG ACGACACGGT CGGCACCGGC ATGGTCGGCG CGCCGGCTTG CGGCGACGTG
ATGAAGCTGC AGATCAAGGT CAACGAGCAG GGCGTGATTG AAGACGCCAA GTTCAAGACC
TACGGCTGCG GTTCGGCCAT CGCTTCGTCG TCGCTGGTGA CGGAATGGGT GAAGGGCAAG
ACGCTGGATC AGGCGCTGGA AATCCGCAAC ACGGCCATCG CTGAAGAGCT GGCCCTGCCG
CCGGTGAAGA TCCACTGCTC GATTCTGGCC GAAGACGCCA TCAAGGCGGC CGTGGCCGAC
TACAAGGAAA AGCACGGTTC GGCCGAGCAG AAGGCTGCTT GA
 
Protein sequence
MSYSNQVLDH YENPRNVGSF EKGDDTVGTG MVGAPACGDV MKLQIKVNEQ GVIEDAKFKT 
YGCGSAIASS SLVTEWVKGK TLDQALEIRN TAIAEELALP PVKIHCSILA EDAIKAAVAD
YKEKHGSAEQ KAA