| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0841 |
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| Symbol | |
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| ID | 6288660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 891225 |
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| End bp | 892406 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642624405 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001898423 |
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| Protein GI | 187927936 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.85215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTCT CCGTGTTGTT CCGTCGTTAC CGTTCGTTCC GGTGGTTGCT GTGCGCGTGC
GCCTTGGCTG TGTTGCAGGC GTGCGGCAAG CATGCTGATG AGGCTGCCAA GCCAGCCGGC
CCGCCGGAAG TCGAGTTTGC CGTTGCGCAG CGCTCCGATG CGCCGCTGGT GACCGAACTG
CCTGGCCGCC TGGAGCCGTA TCGCACGGCG CAAGTGCGCG CGCGCGTCGA CGGCATCGTC
CTCAAGCGCG CCTATGAAGA AGGCCAGGTG GTCAAGGCCG GCCAGGTGTT GTTCCGCATC
GATCCGGCGC CGCTCAAGGC ACAGGTGGAC GCCGCGCAAG GCGCGCTTGC CCGTGCGCAG
GCACAACTGG CCATCGCGCG CGACAAGGCT GCCCGCTACA AGGGGCTGGC CGCCACGCGT
GCCGTGAGCG AGTTGGAATA CGCTGAAGCG CAATCCGCCG AGCGTCAGGC CGCCGCAGAC
GTGGTGTCCA GCCGTGCCGC GCTGGAAACC GCGCAACTGC GCTTGGGCTA TGCCACCGTC
ACGGCCCCGA TTGCCGGCCG CTCGCGCCGC GCGCAGGTCA CCGAAGGTGC GCTGGTCAAG
GAAGACGCTG CGACGACGCT CACCACGGTC GAACAGATCG ACCCGATCTA CGTCGACTTC
GCGCAGCCCG CTGCCGAAGT GCTCGCCTTG CAGCGCGCGC TCAAGAAGGG CCAGGCCGCT
GCATTGAGCG GCCAGGACAT CGGCGTGCAG GTCATCCTGA GCGATGGCGT GGCGTACGAG
CGCCCGGGCA GGCTGCTGTT CTCCGATCTG ACGGTGGACC GTGCGACGGA TAACGTCTCG
ATGCGCGCGG TGCTGCCCAA TCCCGATGGC CTGCTGCTGC CCGGCATGTA CGTGCGGGTG
AAGCTTTCGC ACGCCGTGCA GCAGGGCGCG GTGACGGTTC CGAAGGGCGC GTTGCAGCGC
GACCGCCAGG GGGCATCGGT GTTTGTGGTG CAGGCCGACA ATACGCTGGC GGCCCAGCCC
GTGGCTGCGC AAACGTTGGC CGGTGACCAA TGGCTGGTGA CGGGCGGGCT ATCCGGTGGG
GAGCGGGTTG CCATCCCAGG CATGCAGACG CTCGAGACCG GCATGGCAGT CAAGCCGATT
CCTGCCGCAC CGCGCGCTGA TACGAAGACG AAGAGGGGCT GA
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| Protein sequence | MMFSVLFRRY RSFRWLLCAC ALAVLQACGK HADEAAKPAG PPEVEFAVAQ RSDAPLVTEL
PGRLEPYRTA QVRARVDGIV LKRAYEEGQV VKAGQVLFRI DPAPLKAQVD AAQGALARAQ
AQLAIARDKA ARYKGLAATR AVSELEYAEA QSAERQAAAD VVSSRAALET AQLRLGYATV
TAPIAGRSRR AQVTEGALVK EDAATTLTTV EQIDPIYVDF AQPAAEVLAL QRALKKGQAA
ALSGQDIGVQ VILSDGVAYE RPGRLLFSDL TVDRATDNVS MRAVLPNPDG LLLPGMYVRV
KLSHAVQQGA VTVPKGALQR DRQGASVFVV QADNTLAAQP VAAQTLAGDQ WLVTGGLSGG
ERVAIPGMQT LETGMAVKPI PAAPRADTKT KRG
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