| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0823 |
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| Symbol | |
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| ID | 6287497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 866928 |
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| End bp | 868811 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642624386 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_001898405 |
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| Protein GI | 187927918 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGC CTCAAGACGG CAGCGGCGCC ATTGCGCACG CTGAAACCAT CAACACCAAT
ACCGAAAACC TCATCGCCGA AACCGCGACC CGTGCAAGCG CCTTTGCTGC ACTGGGCCTG
GACGACCGCA TCGTCCGCGC GCTTGGCGAA GTGAACTACA CCACGCCCAC GCCGGTGCAG
GCGCAAGCCA TTCCGGCCTG CCTGTCCGGC CGCGACCTGC TGGTCACGAG CCAGACTGGT
TCGGGCAAGA CCGCCGCTTT CATCCTGCCG GCCATCCAGC GCATCAGCGA ACAGCCTGAG
CCGCAGCGTC CGCGCATGGA CGGCCCGCCG CAACGCATGA AAGGCCGCCG CCCACGCCCG
GCACCGGCCA AGCCGTCGCT GCTGGTGCTC ACGCCCACGC GTGAACTGGC CCTGCAAGTG
ACCACCGCCA CCGCACAATA CGGCCGCCAT CTGCGCCGTA TCGTCTGCGC GAGCATCCTG
GGCGGGATGC CCTACCCGAA GCAGCTCGAC ATGCTGGCCC GCATGCCGGA CATCATCATC
GCCACGCCGG GCCGCCTGCT CGACCACATC GACTCGGGCC GCATCGACCT GTCGGCACTC
GACATGCTCG TCTTTGACGA AGCCGACCGC ATGCTGGACA TGGGCTTCTC GGATGACATC
GAAGCCATCG TCGGCGCTAC GCCGGCGACG CGTCAGATGC TGATGTTCTC GGCCACCATG
GACCGCCGCA TCGAGCAACT GGCCGAGCGC ATGATGCGCG AGCCGCAGCG CATCGAAATC
GCCGCCGCCA AGGTCGACCA AAGCAACATC GAAGAGCGCC TGCACTTCAC CGACGACATG
TCGCACAAGC AGCAACTGCT GGATCACCTG CTGCGCGATG CATCGCTCAA GCAAGCCATC
GTCTTCACGG CGACCAAGCG TGATGCCGAT TCGCTGGCCG AACGCCTGAC CGAGCACGGC
TTCTCCGCCG GCGCCTTGCA TGGCGACATG CACCAGGGCG CGCGCAACCG CACGCTGACG
GCGCTGCGCC GCGGCCAGTT GCGCGTGCTG GTGGCCACCG ACGTGGCAGC GCGCGGCATC
GACGTGCCGG ACATCACGCA CGTGGTCAAC TTCGACCTGC CCAAGCAAGC TGAAGACTAT
GTGCATCGCA TCGGCCGTAC GGGCCGCGCG GGCCGCAGCG GCATCGCCAT CAACCTGGTG
AACCACAACG ACACGTTCCA ATGGCGCCGT ATCGAGCGCT TCGTTGATCG CCGCATCGAT
GCATCGGTGG TTGAGGGCCT GGAGCCGAAG CGCTCGGCCA AGCCCCGCAC AGGTGGCCCG
CGTGCCGGCG GCGACCGTGG CGGCTACCGC GGAAACGGTG GCAATGGCGG CGGTTATCGC
GGCCAGCGTG AAGGCTACGG CGCACGCCAA GGCGGCAACG GTGGCAATAG CGGCAACAAC
GAAGGCCGCT TCCAACGCAG CTTCGCCGGC GACCGCGACG GCTTTGCTCC GCGCCGCGAC
GACCGCAACG GCAACAGCAA TAGCAACAGC GGCGGCTACC AAGGCGCCCA ACGCGAATGG
AACCGCGACG ACCGCGCCCC GCGTCCGTCG TATGGCCAAG GCCAGCAAAA CCGTGGCGAC
TGGCAACAAC GCCCCGCGCG CACGCAAGGC ACGCAAGACG GCAACCGTGG CTACGGCAAC
AGCGCCGGCA CCGGCAACGG TGGCGGTTAT GGCAATCGCG ATGGCAACCG CGAAGGCGCT
GCCCCGCGTC GCTTCGGCGA CAACAACGGC GGCAACCGCT TCGGCGACGC TGGCAACGGC
GCGCAGCGTC GCAGCTATGG CAATCGCGAC GGCAACCGCG ACAGCTACGG CAGCAAGGGC
CGTTCGCGCG ACTTCGATCG TTGA
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| Protein sequence | MTQPQDGSGA IAHAETINTN TENLIAETAT RASAFAALGL DDRIVRALGE VNYTTPTPVQ
AQAIPACLSG RDLLVTSQTG SGKTAAFILP AIQRISEQPE PQRPRMDGPP QRMKGRRPRP
APAKPSLLVL TPTRELALQV TTATAQYGRH LRRIVCASIL GGMPYPKQLD MLARMPDIII
ATPGRLLDHI DSGRIDLSAL DMLVFDEADR MLDMGFSDDI EAIVGATPAT RQMLMFSATM
DRRIEQLAER MMREPQRIEI AAAKVDQSNI EERLHFTDDM SHKQQLLDHL LRDASLKQAI
VFTATKRDAD SLAERLTEHG FSAGALHGDM HQGARNRTLT ALRRGQLRVL VATDVAARGI
DVPDITHVVN FDLPKQAEDY VHRIGRTGRA GRSGIAINLV NHNDTFQWRR IERFVDRRID
ASVVEGLEPK RSAKPRTGGP RAGGDRGGYR GNGGNGGGYR GQREGYGARQ GGNGGNSGNN
EGRFQRSFAG DRDGFAPRRD DRNGNSNSNS GGYQGAQREW NRDDRAPRPS YGQGQQNRGD
WQQRPARTQG TQDGNRGYGN SAGTGNGGGY GNRDGNREGA APRRFGDNNG GNRFGDAGNG
AQRRSYGNRD GNRDSYGSKG RSRDFDR
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