Gene Rpic_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0822 
Symbol 
ID6287496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp865490 
End bp866788 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content67% 
IMG OID642624385 
Productprotein of unknown function DUF323 
Protein accessionYP_001898404 
Protein GI187927917 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT TCTTCATGCT CCCCGATCCG ACCTTCATCG GATCGCTTCC CGACTGGACC 
GACGGCCGGC GCTTGCCGCG CCAGGGCATC GCGCACAGCC TGGTCGACGC GCGCAATCGC
ACGCTGGCCT TGTTGTCCGC GTTTGGCGAC ACGCAGCGCG GCTGGCAGAT TGAACGCGTC
GAGCATCACG CCCCGCCGCT TTGGACGCTG GGCCAGCTGG CCTGGTTTGC CGAGTTCTGG
TGCCTGCGCG AGCCCCGCCG CAACGGCAGC GACACCGTCG AAGACGGCGC CGGCACCGAA
TGGGAACTGG CGCGCTGGCA AGCCACGCTG CCGGCCGCGC TCGACGGCGC CGACACGTTC
TTCGACATGG ACCGGATGCC ACCAGAGGCA TGCTGGGAGC TGACGCTGCC CGGCATCGCG
ACGATCAAGC AGTACGCGCA TGACGTGCTC GACCGTGTGC TCCGTAAGCT CGCCACACTT
GGCACCGATG ACGATGCGGC GTTGGAGCCG TTCCGCTGGG CGGTCTTTCA CGAAGACCTG
CGCGCCGAAC ATCTGCACGG CCTGCTGCAG GTATTGGGCC TGCAACCCGC TGGGCAACCG
CCGCTGGCCG CCGTGGCTGT ACCGGCTGCG CAGACATTGT CGTTGCCCGG TGGCCGCTTC
CAAATGGGCT GGCCCGACGC CGATGGGTTC TTCTTCGACA ACGAATGTCC GCCGTATCGC
ACATACGTGC CGGCGTTCGA GATTGATGCA CAGCCCGTCA CGAATGGCCA ATACCTGGAG
TTCATCGAGG ACCGTGGTTA CGACCATCCG CAATGGTGGT CGCCGGCCGG CATGGAGTGG
CTGATGATGC AGGAGCGCTC GGCGCCGCTC GGTTGGCAGC GCGATCCCAC CACGCGCAGC
TGGCAGGCAC TGCGCTACGG TCAGGCGCGT ACGATCAACC GTGACGAACC CGTGCGCCAT
GTGAGCCTGT ACGAAGCCCA GGCGTGGTGC CGCTGGGCCG GCCGTCGCTT ACCGACGGAA
GACGAATGGG AGATGGCCGC GGTGCAAGGC CGCGCAGGCT TCCATTGGGG GCAGGTGTGG
GAGTGGACGT CATCGCCGTT CGAGCCGTAT CCGGATTTCG TGCCCGGCGT GCCGCGTGGT
CGTGCGGCGA GCCTGTCGGC GCCGCACTTC CAAACGATGC AGACGGTGCG CGGTGCTGCC
GCTCATACTC CACAGCGCGC GCGTCATCCG CGTTTCCGGG GCTTCCTGCT GCCGGAGCGC
GACGACATCT TTGTCGGCTT CCGAACCTGT GCGCTTTGA
 
Protein sequence
MAEFFMLPDP TFIGSLPDWT DGRRLPRQGI AHSLVDARNR TLALLSAFGD TQRGWQIERV 
EHHAPPLWTL GQLAWFAEFW CLREPRRNGS DTVEDGAGTE WELARWQATL PAALDGADTF
FDMDRMPPEA CWELTLPGIA TIKQYAHDVL DRVLRKLATL GTDDDAALEP FRWAVFHEDL
RAEHLHGLLQ VLGLQPAGQP PLAAVAVPAA QTLSLPGGRF QMGWPDADGF FFDNECPPYR
TYVPAFEIDA QPVTNGQYLE FIEDRGYDHP QWWSPAGMEW LMMQERSAPL GWQRDPTTRS
WQALRYGQAR TINRDEPVRH VSLYEAQAWC RWAGRRLPTE DEWEMAAVQG RAGFHWGQVW
EWTSSPFEPY PDFVPGVPRG RAASLSAPHF QTMQTVRGAA AHTPQRARHP RFRGFLLPER
DDIFVGFRTC AL