| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0763 |
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| Symbol | |
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| ID | 6288982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 803619 |
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| End bp | 806177 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642624327 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001898346 |
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| Protein GI | 187927859 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.794501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0266103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAC GCCCGACCAC CAAACCGGTC CCCAGAAAGA TTGATGGAAA AGCCTTCGCT
GCTCGTCCCC GAGCAAACCC GCTTTACTTG GCTTTGTGTC TGGCGGTTTT CAATAGTGCG
CGCGCGGCGG AGGGGGAAAC CCTTGTCGCA CAGGCTGCCC CGACGCTGCT TGCTTTCAAT
ACGAACTTTT TGCATGGCCA GGGCCGTCCG GCAGATCTGA GCGCCGTACT TTCTTCCGGA
AACAGCGTGC CGCCCGGCAC GTACCGTGTC GAGGTGCAGG TCAATGGAAA CTTGGTGGGG
CGGCGCGACG TCGACTTCCA TCAAGAGGGT GGCAAGGGCA AGGTGCGTCC ATGCCTCACC
GCGCAGATGC TCCAGGACTT TGGCGTCGAC CTGACTGCCA TTACTCCAGC CCTTGATCTC
AATAGCCAAG CGTGTCTGGA TTTGCCGCAG CTAATGGACC AAGCGGTCGT CGACTTCGAC
GCTGGCCGGC TGCAACTGAA CCTGAGCATT CCCCAGGCGT TTCTGTCGCG CGCTGCACGT
GGCTATGTGG ATCCGGCCTT GTGGGACGAG GGCGTCACCG CTGGCTACGT CAACTACCAG
TTCAGCGGAA ACTACGGCCA CGGCCGCGTT GGCAATGACA GCAGCAGCTA TTATCTTGGC
CTGCAGAATG GCGTGAATAT TGGCCGTTGG CGTCTGCGCA ACGAATCTGC GTTGAGCGGA
AGCAATGATG GCCAGACCCG CTTCAAAAGC AATCGCACGT TGTTGCAACG CGACGTCGAC
GCCATCAAGG GGCAACTGAC GCTTGGCGAG CAATACTCCG ACGCGACGCT ATTCGACAGC
GTACGCTTCC GCGGTGTGCA GGTCAGTTCG GACGACGCGA TGCTGCCGGA TAGCGAGCGC
GGCTATGCAC CGGTGGTGCG TGGGCAGGCT GCGACGAATG CTGTCGTGGA GGTTCGCCAG
AGCGGCTACG TGCTATATCG CGCCAACGTG CCGCCGGGGC CATTCCAACT GACCGATATT
TTCCCGACCG GCTCAAACGG CGACCTTGAA ATCACCGTGA TCGAAGCCGA TGGCACCAGG
CGCGTTACTC ACCAAGCCTT TTCGAGCTTG CCCCTGATGC TCCGCAAGGG GCGATTGAAG
TATGCATTTG CGGCCGGGAA GTACGATGGG GATCAAACGG CCTCACCTAA GCTCGTGGCC
GGATCGCTTG TTTATGGCTT CACGGACAAC AGCACCGTGG CGGGCGGCTT CCAAGCGTCG
CGGGATTTCC AGGCCCTCAA CATGGGCGTT GGTACCAACA CACCGATCGG TGCGCTGTCG
CTAGACATCA CGCAATCGAG CAGCCGCGTG CAGGGCAAGC GCGATACCGG CCAAAGTGTG
CGTGTCCTGT ATGCCAAGAC TTTCACGCGG ACGAACACCA ACTTCACGCT GGCGGCATAT
CGGTATTCCA CGTCGGGCTA TCGCACGTTT AGCGATCACG TCAACGACCT CGGCAACGCG
GGCGTGCAAG CTGGTCGTAG TCGCTCGCGC ATCGACTTGA CGACCAGTCA GGACTTGGGT
GGGCCGCAAC GTGAATATGG CAGCGTCTAT CTGAACATCA GCCAGCAGAC GTATTGGAAT
CAGCCGGGCT CCAGCCGCAG CATTAGCGTC GGCTATGGCA ACACCTGGAA GCGACTCAGC
TACAACTTGA GCCTGAGCCA GACCAAAGAC AGTCGATTTG GCAACAACGG CAGCAATACG
CAGGTCATGC TGACGATGTC GATCCCGCTT GGAGGCAAGC TGCACTCCCA GCGCGCATAC
ACCAACGTCA GCAACGACAG CAACGGCGGC ACGAATATTC AGAGCGGCCT GAGCGGTTTC
GCCAGCGAAA AAACGTCTTA CGCCATGCAA GCCGGTTATA CCAACGGCGG GCGAGGTGCA
ACGGGCGGTG CCAGCATTAC GCACGAGGCC GATGCAGGCC AGCTCTCGGC CAACGTCAAC
GTCGCCAATG ACTACCAATC GGCCAGCATC GGGGCCATGG GCGCGGTCGT GGTCCATGGC
GGCGGTGTCA ACCTGAGCCG CACGGTTGGC GACACCTTCG CTTTGATGAA GATGGAGGGC
CTTCGGGGTG TCGATGTTCG CACCGAGGCA GGCACCTCAG TCGGTCGCAA CGGATATGCC
GTCGTGTCCT ATGCGCAGCC GTACCGCCTG AATGCACTGC GCCCCGACAC GCATAACCTC
GGTGCCGACA TTGAACTGAC AGACACCGTT AAACAGGTGG TGCCGCGTCG TGGCGCCATT
GTGCAGGCGA CCTTCAAGGG TTACAGCGGC CAGCGTGCGC AGTTCACCTT CCAGCAGGCA
GACGGCAAGC CCGTACCGTT TGGCGCCAGC GTGGAAGACG CCCAAACCGG CAGGCAGTTG
GGCATTGCAG ACCCGAACGG CAGTGCCTTT GTGCTGCTTG GCCAGGAACA AGGCACCTTG
TCGGTGAAAT GGAAAGAAGG CCAATGCCAG GCACCCTATG CGTTGCCGAA AGCAGAAGCT
GGCCGGAACT ACCAGCGGCA GACGTTGCGT TGTAGATAG
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| Protein sequence | MSKRPTTKPV PRKIDGKAFA ARPRANPLYL ALCLAVFNSA RAAEGETLVA QAAPTLLAFN
TNFLHGQGRP ADLSAVLSSG NSVPPGTYRV EVQVNGNLVG RRDVDFHQEG GKGKVRPCLT
AQMLQDFGVD LTAITPALDL NSQACLDLPQ LMDQAVVDFD AGRLQLNLSI PQAFLSRAAR
GYVDPALWDE GVTAGYVNYQ FSGNYGHGRV GNDSSSYYLG LQNGVNIGRW RLRNESALSG
SNDGQTRFKS NRTLLQRDVD AIKGQLTLGE QYSDATLFDS VRFRGVQVSS DDAMLPDSER
GYAPVVRGQA ATNAVVEVRQ SGYVLYRANV PPGPFQLTDI FPTGSNGDLE ITVIEADGTR
RVTHQAFSSL PLMLRKGRLK YAFAAGKYDG DQTASPKLVA GSLVYGFTDN STVAGGFQAS
RDFQALNMGV GTNTPIGALS LDITQSSSRV QGKRDTGQSV RVLYAKTFTR TNTNFTLAAY
RYSTSGYRTF SDHVNDLGNA GVQAGRSRSR IDLTTSQDLG GPQREYGSVY LNISQQTYWN
QPGSSRSISV GYGNTWKRLS YNLSLSQTKD SRFGNNGSNT QVMLTMSIPL GGKLHSQRAY
TNVSNDSNGG TNIQSGLSGF ASEKTSYAMQ AGYTNGGRGA TGGASITHEA DAGQLSANVN
VANDYQSASI GAMGAVVVHG GGVNLSRTVG DTFALMKMEG LRGVDVRTEA GTSVGRNGYA
VVSYAQPYRL NALRPDTHNL GADIELTDTV KQVVPRRGAI VQATFKGYSG QRAQFTFQQA
DGKPVPFGAS VEDAQTGRQL GIADPNGSAF VLLGQEQGTL SVKWKEGQCQ APYALPKAEA
GRNYQRQTLR CR
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