Gene Rpic_0748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0748 
Symbol 
ID6289803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp788107 
End bp788865 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content64% 
IMG OID642624312 
Productband 7 protein 
Protein accessionYP_001898331 
Protein GI187927844 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.421043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTACG GCTTCTTCAG CGCAGGCGGC CTGATCTTCC TGGCCGTGCT GCTGGTCATC 
TCGTCGTTCC GGGTGCTGCG CGAATACGAG CGCGGCGTGG TGTTTCTGCT GGGCCGCTTC
TGGCGCGTGA AGGGGCCGGG GCTGGTGCTG ATCGTGCCGG CGATCCAGCA AATGGTGCGC
GTGGATCTGC GCACGGTGGT GATGGACGTG CCGCCGCAGG ATGTGATCTC GCACGACAAC
GTGTCGGTCA AGGTCAATGC GGTGGTGTAC TTCCGGGTGG TCGATCCGGA GCGCGCCATC
ATCCAGGTGG CCAACTATCT GGAAGCGACC AGCCAGCTCG CCCAGACGAC GCTGCGGGCC
ATCCTGGGCA AACACGAGCT GGACGAGATG CTGGCCGAGC GCGAAAAGCT CAACCTCGAC
ATCCAGAAGG TGCTCGACAT CCAGACCGAC CCGTGGGGCA TCAAGATCGC GAACGTGGAG
ATCAAACACG TCGACCTGAA CGAATCGATG ATCCGCGCCA TCGCCCGCCA GGCCGAGGCC
GAGCGCGAAC GCCGCGCCAA GGTCATCCAC GCAGAAGGCG AACTGCAGGC ATCGGAAAAG
CTGCTCGAAG CTGCACGCAT GCTGGCCCAG CAGCCCGAGG CGATCCAGTT GCGCTATCTC
CAGACGCTCA CGCAGATTGC GGGCGACAGA AGCTCGACGA TTGTCTTCCC GCTGCCGATG
GAAGTGCTGG GCGCGGTAAA GAAAGCCGCC GGCGGCTGA
 
Protein sequence
MLYGFFSAGG LIFLAVLLVI SSFRVLREYE RGVVFLLGRF WRVKGPGLVL IVPAIQQMVR 
VDLRTVVMDV PPQDVISHDN VSVKVNAVVY FRVVDPERAI IQVANYLEAT SQLAQTTLRA
ILGKHELDEM LAEREKLNLD IQKVLDIQTD PWGIKIANVE IKHVDLNESM IRAIARQAEA
ERERRAKVIH AEGELQASEK LLEAARMLAQ QPEAIQLRYL QTLTQIAGDR SSTIVFPLPM
EVLGAVKKAA GG