| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0719 |
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| Symbol | |
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| ID | 6287357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 753176 |
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| End bp | 754786 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624282 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001898302 |
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| Protein GI | 187927815 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.407783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA CCCAACAAGC CGATATCGTG GTGGTGGGCT CCGGCGTGGC CGGGGCGCTG
GTGGCGTACG AGCTGGCACG CGCGGGGAAG TCGGTGCTGA TGCTCGAAGC GGGGCCGCGC
CTGCCGCGCT GGGAAATTGT CGAGCGCTTC CGCAACCAGG CCGACAAGAT GGATTTCATG
GCGCCGTATC CGTCAACGCC ATGGGCACCG CATCCGGAAT ATGGCCCGCC CAACAACTAC
CTCGTGCTCA AGGGTGAGCA TCAGTTCAAC TCGCAGTACA TCCGGGCGGT GGGCGGCACG
ACCTGGCACT GGGCCGCATC GACGTGGCGC TTTTTGCCGA ATGATTTCAA GCTGCGCAGC
GTGTATGGCA TCGCGCGTGA CTGGCCGATC CAGTATCAGG ATCTTGAACG CTATTACGGC
CGGGCCGAAG AGGCGCTGGG CGTGTGGGGC CCGAACGACG AAGACCTCGG CTCGCCGCGC
AGCCAGCCGT ATCCCATGGC GCCGCTTCCG CTGTCATTCA GTGAACGCAC GATCAAGGAT
GCACTCAACG CGCACGACGC GAGCTTGCAC GTGGTCACCG AGCCGGTGGC GCGCAACAGT
CGCCCGTACG ACGGTCGCCC GACCTGCTGC GGCAACAACA ACTGCATGCC GATCTGCCCG
ATCGGAGCGA TGTACAACGG CATCGTGCAT GTGGAGAAAG CCGAGCAGGC CGGCGCACGG
CTGATCGAGA ACGCCGTGGT CTTCAAGCTC GAAGTCGGTC CCAACAAGCG CATCGTGGCG
GCGCGGTACA AGGATTCGAA AGGCGCCGAG CACCGCGTGG AAGGCAAGTG GTTCGTGCTG
GCTGCCAACG GCATCGAAAC GCCCAAGCTG ATGCTGATGT CGACCAGCCA GGATTTTCCG
AAGGGCGTTG GCAACAGCTC CGACATGGTG GGGCGCAACC TGATGGATCA CCCTGGCACC
GGCGTGAGTT TCTATGCCGA CCGCAAATTG TGGCCGGGGC GCGGGCCGCA GGAAATGACC
TCGCTGATCG GCTTTCGCGA TGGGCCGTTC CGCGCCACGC AGGCCGGCAA GAAGCTTCAC
CTGTCGAACA TGTCGCGTAT CGAGCAGGAG ACGCAGCGCA TCTTCAAGGA GGGCAAGCTC
ATCAAGCCCG CCGAACTGGA TGCGCGCATC CGAGATCAGG CCGCGCGCTA TGTGCAGTTC
GACAGTTTTC ACGAGATCCT GCCTCTGCCC GAGAACCGGA TTGTGCCGAG CGCAAGTGAG
GTCGACGCCA TCGGCATTCC GCGTCCGGAG ATCACGTACC ACATCGACGA CTACGTCAAA
CGCAGCGCCG TGCATACACG CGAGGTCTAC GCGACTGCTG CACAGGTGAT GGGCGGTACC
AATGTCGAGT TCCACGACGA CTTCGCGCCC AACAACCACA TCACCGGCGC AACCATCATG
GGTGCCGATC CGAAAAACTC CGTGGTCGAC AAGGATTGCC GGACGTTTGA CCACCCGAAC
CTGTTCATCA GCAGCAGCTC CACCATGCCG ACGGTTGGCA CCGTGAACGT GACGCTGACC
ATTGCGGCGC TGGCGCTGCG GATTGCCGAT CAACTGAAGA AGGAGGCGTG A
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| Protein sequence | MADTQQADIV VVGSGVAGAL VAYELARAGK SVLMLEAGPR LPRWEIVERF RNQADKMDFM
APYPSTPWAP HPEYGPPNNY LVLKGEHQFN SQYIRAVGGT TWHWAASTWR FLPNDFKLRS
VYGIARDWPI QYQDLERYYG RAEEALGVWG PNDEDLGSPR SQPYPMAPLP LSFSERTIKD
ALNAHDASLH VVTEPVARNS RPYDGRPTCC GNNNCMPICP IGAMYNGIVH VEKAEQAGAR
LIENAVVFKL EVGPNKRIVA ARYKDSKGAE HRVEGKWFVL AANGIETPKL MLMSTSQDFP
KGVGNSSDMV GRNLMDHPGT GVSFYADRKL WPGRGPQEMT SLIGFRDGPF RATQAGKKLH
LSNMSRIEQE TQRIFKEGKL IKPAELDARI RDQAARYVQF DSFHEILPLP ENRIVPSASE
VDAIGIPRPE ITYHIDDYVK RSAVHTREVY ATAAQVMGGT NVEFHDDFAP NNHITGATIM
GADPKNSVVD KDCRTFDHPN LFISSSSTMP TVGTVNVTLT IAALALRIAD QLKKEA
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