Gene Rpic_0715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0715 
Symbol 
ID6287655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp749342 
End bp750427 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content66% 
IMG OID642624278 
Productprotein of unknown function DUF72 
Protein accessionYP_001898298 
Protein GI187927811 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.044641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0915207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGACA GCTCCCCCAT CGACGATCTG TTCGGCGCGC CACTCGCACC CAGCGACAAC 
GCGACCGCCG AACCCGGCAC ATCCGCTCCG AAACCCAAAC GCTCGCCCGC CCGACAGGGT
GTGCAGCCGG CCGTGGTTGC GCCCGATGTG GCTGCGCTAG CGCAGCGCTT GCCGCGCGAT
CTGCGCATCG GCACGTCGTC GTGGTCGTAT CCGGGGTGGG ACGGGCTGGT GTATGCGGGC
GAGTACTCCG ATTCGATGCT CGCACGCAAA GGCCTGGCGG CTTATGCCCA GCACCCTTTG
CTGCGCACGG TCAGTATCGA TCGCGGGTTC TATTCGCCAA TCCCGCTGGC GGACTACGTC
GCCTACGCGG CCAGCGTGCC GGAAGACTTC CGCTTTGCAG TCAAGGCAAC CTCTGCCGTA
TGCGACGCAT GGATTCGTGA ATCGGACGGG CGCGGGCGCA TGGCCAATCC TGCCTTCCTG
AATCCTGAAT TTGCGATCCG CGACTTTGTT GAGCCGGCCA CCCGCGGGCT CGGGACGCGA
TGCGGGCCGC TCGTGTTTCA GCTTTCGCCG CTGGGCGCGC TGGCTGAAGA TGCCACCGGC
TTTGTGGAAC GGCTTGCGGC GTTCCTGACC GCGCTGCCGC CACTCGATCC GCAACGCAAT
CCCGATGCCG TCTACACGGT GGAATTGCGC GACGCCACGC TGCTCACGCC GCGCTTCATC
AAGATGCTGC GCGCGGCGGG GGTGCGTTAT TGCGTCGGCC TGCATGAGCG GATGCCGGCA
GTGGACCGGC AAGCGGCAGC CGTTGCATTG CTGGATGAAG GCGCAGGCGG CCCGCTGGTG
GTGCGCTGGA ACCTGAACAG CCGCTATCGC TACGCGCAAG CCGAAGCAGC GTACAAACCG
TTCAACAAGC TCGTCGATGA AGACCCGTTC TCGCGGGAGA CGTTGGCCGA CATGGCGGTC
GCCGCGCTGG CGGCTGGGCG CAAGGTAACG ATCCTGGTCA GCAACAAGGC AGAAGGATCA
TCCCCGTTGT CGTGCATCAA GCTGGCCGAG GCCATTGCCG CGCGCTTGCC GGCAGACGCA
GCGTAG
 
Protein sequence
MTDSSPIDDL FGAPLAPSDN ATAEPGTSAP KPKRSPARQG VQPAVVAPDV AALAQRLPRD 
LRIGTSSWSY PGWDGLVYAG EYSDSMLARK GLAAYAQHPL LRTVSIDRGF YSPIPLADYV
AYAASVPEDF RFAVKATSAV CDAWIRESDG RGRMANPAFL NPEFAIRDFV EPATRGLGTR
CGPLVFQLSP LGALAEDATG FVERLAAFLT ALPPLDPQRN PDAVYTVELR DATLLTPRFI
KMLRAAGVRY CVGLHERMPA VDRQAAAVAL LDEGAGGPLV VRWNLNSRYR YAQAEAAYKP
FNKLVDEDPF SRETLADMAV AALAAGRKVT ILVSNKAEGS SPLSCIKLAE AIAARLPADA
A