Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0654 |
Symbol | |
ID | 6288042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 692748 |
End bp | 693461 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642624216 |
Product | putative protein with proline-alanine-aspartic repeated motif |
Protein accession | YP_001898237 |
Protein GI | 187927750 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.791492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.041416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCAA CGACGAACGT CCTGATCAAG ACGGAGGACG GCCGCGAAGC CTTGGCCCAG CGCCGCCACG ACATGCAGAT GCGCCAGCGC CATCTGCTCA TCCTCATCGA CGGTGCCCGC ACGGTGGGGC AACTGCATCA ACTGCTGAGC GACTGGCCGG ACTTCGACGA ACTGCTGCTA GGGTTGCAAC GGGCCGGCAT GGTCGACGTG CTGCCTGGTA TCTCGCATGA CAACGCACCG GCTGCAGAAC CGTTCGACCC CATCACGCAC TTCAACCGTC CCTTGCTGGA CGATGACGCG CACGGCGCAC CTGCCGCCCT GTCGCTCATC TACGACAAAC TGCCGCCGTT GACCGGCATG ACGCTCGGCC TGCAAGCGGT GGCGGCGCCC ATCGACGAGC CTGCGGCCAA TGACGCAAAC AGGCCGCGGG CGGCGCCCGT CCAGGCTTCT GCTACGCCGC AGCCAGCCGT CCCGCCGGAG TTGGCCGACG TGTTGCCCAA CGTGGTCAAG GTCGAGTTGA TGCGTTTGGC GGTGCAGCAC TTCGGCTCGG CCGCGGGCGC CGCCATGCCG CTGCTGCGTG CCTGCAAGGA AGACCCGCAG TCGCTGTGCG ACGTGGTTGC CGCGTGCGCC AAGGCTGCCG CCCCGACGGC TGGCGAGCAG GCCGCGGCGA AGTTCGTGGA TGCGGCAATG CAGGCGATGG CGCTGCGGCG CTGA
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Protein sequence | MLATTNVLIK TEDGREALAQ RRHDMQMRQR HLLILIDGAR TVGQLHQLLS DWPDFDELLL GLQRAGMVDV LPGISHDNAP AAEPFDPITH FNRPLLDDDA HGAPAALSLI YDKLPPLTGM TLGLQAVAAP IDEPAANDAN RPRAAPVQAS ATPQPAVPPE LADVLPNVVK VELMRLAVQH FGSAAGAAMP LLRACKEDPQ SLCDVVAACA KAAAPTAGEQ AAAKFVDAAM QAMALRR
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