Gene Rpic_0654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0654 
Symbol 
ID6288042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp692748 
End bp693461 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID642624216 
Productputative protein with proline-alanine-aspartic repeated motif 
Protein accessionYP_001898237 
Protein GI187927750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.791492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.041416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCAA CGACGAACGT CCTGATCAAG ACGGAGGACG GCCGCGAAGC CTTGGCCCAG 
CGCCGCCACG ACATGCAGAT GCGCCAGCGC CATCTGCTCA TCCTCATCGA CGGTGCCCGC
ACGGTGGGGC AACTGCATCA ACTGCTGAGC GACTGGCCGG ACTTCGACGA ACTGCTGCTA
GGGTTGCAAC GGGCCGGCAT GGTCGACGTG CTGCCTGGTA TCTCGCATGA CAACGCACCG
GCTGCAGAAC CGTTCGACCC CATCACGCAC TTCAACCGTC CCTTGCTGGA CGATGACGCG
CACGGCGCAC CTGCCGCCCT GTCGCTCATC TACGACAAAC TGCCGCCGTT GACCGGCATG
ACGCTCGGCC TGCAAGCGGT GGCGGCGCCC ATCGACGAGC CTGCGGCCAA TGACGCAAAC
AGGCCGCGGG CGGCGCCCGT CCAGGCTTCT GCTACGCCGC AGCCAGCCGT CCCGCCGGAG
TTGGCCGACG TGTTGCCCAA CGTGGTCAAG GTCGAGTTGA TGCGTTTGGC GGTGCAGCAC
TTCGGCTCGG CCGCGGGCGC CGCCATGCCG CTGCTGCGTG CCTGCAAGGA AGACCCGCAG
TCGCTGTGCG ACGTGGTTGC CGCGTGCGCC AAGGCTGCCG CCCCGACGGC TGGCGAGCAG
GCCGCGGCGA AGTTCGTGGA TGCGGCAATG CAGGCGATGG CGCTGCGGCG CTGA
 
Protein sequence
MLATTNVLIK TEDGREALAQ RRHDMQMRQR HLLILIDGAR TVGQLHQLLS DWPDFDELLL 
GLQRAGMVDV LPGISHDNAP AAEPFDPITH FNRPLLDDDA HGAPAALSLI YDKLPPLTGM
TLGLQAVAAP IDEPAANDAN RPRAAPVQAS ATPQPAVPPE LADVLPNVVK VELMRLAVQH
FGSAAGAAMP LLRACKEDPQ SLCDVVAACA KAAAPTAGEQ AAAKFVDAAM QAMALRR