Gene Rpic_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0652 
Symbol 
ID6288765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp690618 
End bp691730 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content66% 
IMG OID642624213 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001898235 
Protein GI187927748 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0749879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTC TCTTCCAGCC TTTCTCCCTG CGCGGTCTCA CGCTTGAGAA CCGCATCGTC 
ATTTCGCCGA TGTGCCAGTA CTCGGCCGAC AACGGCCAAG CCACGGCGTG GCACCACACG
CATCTGGGCA GCCTGTCCCT TTCGGGCGCC GGATTGCTGA TGATCGAAGC GACCGCGGTG
TCGCCAGAAG GCCGCATCAC CAACGGCTGC CTGGGTTTGT GGGACGACGC GACCGAAGCC
GCGCTTGAGC GCACGCTGGC TGCCATTCGC CAGAATGCGC TGGTGCCGAT CGGCATGCAG
ATCGCGCACG CGGGCCGCAA GGCTTCGAGC GCTCGGCCTT GGGAAGGCGG CGCATTGCTG
GCGCTCGATG CCGGCGGCTG GGAAACGATG GGTCCCTCCC CGCTGCCACA GCGCCCTGAA
GAGCGTGCCC CGCGCGAAAT GACCGATGCG GACCTCGCCC GCGTGCGCGA TCAATTTGTC
GATACCGCGC GTCGGGCTGT GCGCTTGGGC CTATCGGCCA TCGAACTGCA TGCCGCACAC
GGCTATCTGC TGCACGAATT CCTGTCGCCG ATCGCCAATC AGCGCACCGA TGCCTACGGC
GGTTCGCGTG AGAACCGCAT GCGTTATCCG CTGGAGATTT TTGATGCGGT GCGCGCCGTG
GTGCCGGACA ATATTCCGGT TGGCGTGCGC GTGTCGGCCA CCGATTGGGT GGAGGGCGGA
TGGGCGCCGG AGGATTCGGT GGTATTTGCG CAGGCACTGC GTGCGCGCGG CTGTGATTGG
ATCGATGCTT CGTCGGGCGG TGTATCGCCG CTGCAGCAGA TTCCGCTGTC GACCGGCTAC
CAGGTGCCGT TTGCCGAGAA GATCCGAAAC GAGGCGGACA TTCCGACCAT CGCCGTCGGC
CTCATCAACG AGGCGCATGA GGCGGAGGCC ATCGTTGCGC AAGGGCGTGC GGATTTGGTC
GCCGTGGGCC GGGCCTTCCT CTACAACCCG CACTGGGCCT GGGCGGCGGC CGCTGAGTTG
GGCGCGACGG TCACGGCGCC GCCGCAATAC TGGCGCGCTT TCCCGCGCCA CGCCAAGAAC
CTCTTCGGCG ATACGCATTT CGGCGCACGC TGA
 
Protein sequence
MSALFQPFSL RGLTLENRIV ISPMCQYSAD NGQATAWHHT HLGSLSLSGA GLLMIEATAV 
SPEGRITNGC LGLWDDATEA ALERTLAAIR QNALVPIGMQ IAHAGRKASS ARPWEGGALL
ALDAGGWETM GPSPLPQRPE ERAPREMTDA DLARVRDQFV DTARRAVRLG LSAIELHAAH
GYLLHEFLSP IANQRTDAYG GSRENRMRYP LEIFDAVRAV VPDNIPVGVR VSATDWVEGG
WAPEDSVVFA QALRARGCDW IDASSGGVSP LQQIPLSTGY QVPFAEKIRN EADIPTIAVG
LINEAHEAEA IVAQGRADLV AVGRAFLYNP HWAWAAAAEL GATVTAPPQY WRAFPRHAKN
LFGDTHFGAR