| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0618 |
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| Symbol | |
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| ID | 6288478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 659863 |
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| End bp | 660609 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624179 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001898201 |
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| Protein GI | 187927714 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.599646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT CTTCTCGTCT ACCGCTGTAT CGCATCCTGC AATCCCAGGG CTTCGGCACG
CGCCGCTATT GCAAGGACCT CGTCCTCGCG GGGTTGGTCT TCATCAACGG CGTCGAGATG
GAAAGCCCCG ATGCGCTGGT CGATACCGCC GGCCTGGTCC TGGATGTCGA CGGTGAGCGC
TGGGCATACC ACGCCCGCGC CTATCTGATG CTCAACAAGC CGGCCGGCGT GGAGTGCTCG
CAAAAGCCGA AACATCATCC GAGCGTGTAC ACGCTGCTGC CGGTGCCGCT GCGTGAGCGC
GCCGTGCAGT GCGTCGGGCG GCTCGACCAG GACACCACGG GGCTGCTGCT GCTGACCGAC
GACGGCCAGT TCGTTCACAC CATCACCAGC CCGCGCCACC AGGTGCCCAA GGTGTATGAA
ATCACCACCG CCGAGCCCGT GACCGAGGCG CAGATCGCCC AACTGTACGC CGGCGTGCTG
CTGGCCGACG AAAATGAAAA CGTTGCCGCC GCCTGGGCCG AGCGCGTCGA CACGCACCAC
CTGCGCATGG CCCTCACGCA GGGCAAATAC CATCAGGTGA AACGCATGGT GGCGGCCGCC
GGCAACCACG TGGACGGATT GCACCGCAGC GCCATCGGCG GGTTGTCGCT GGGTGATCTG
GCGCCGGGCG AATGGCGCTG GCTGGAAGCC GCGGACTTGG AGGCGCTGAA CATCACGCCG
CCGCACGCAA CCGTGACGAG TGCCTAA
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| Protein sequence | MADSSRLPLY RILQSQGFGT RRYCKDLVLA GLVFINGVEM ESPDALVDTA GLVLDVDGER
WAYHARAYLM LNKPAGVECS QKPKHHPSVY TLLPVPLRER AVQCVGRLDQ DTTGLLLLTD
DGQFVHTITS PRHQVPKVYE ITTAEPVTEA QIAQLYAGVL LADENENVAA AWAERVDTHH
LRMALTQGKY HQVKRMVAAA GNHVDGLHRS AIGGLSLGDL APGEWRWLEA ADLEALNITP
PHATVTSA
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