| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0500 |
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| Symbol | |
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| ID | 6289123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 532507 |
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| End bp | 534045 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642624065 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001898087 |
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| Protein GI | 187927600 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.560291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0737665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAA TTCGTCCGAC CCGTTTGCTG ACCCTGTCGC GCAGCGCGCT TGCCTGCGCC
GTGCTCTTGA CCATTGCGGC CTCGCCGCTG GCGCACGCCA AGAAAGCCAA GACCCAGGCG
GCACCGCGCA CCACCGCCGC GCAAACACGC CAGGCTGCAC ACAACCCTGC CGGGTTGCCC
GCCAACGTGG CGCTGGCTTT TGCGCGCGCG CATATCCCGC TGGATGCGGT GAGCGTGTTC
GTGATCCGCA CCGGCACCGC CACGCCCATC CTGCAATGGA ATGCCGACGC CGGAATGAAC
CCGGCGTCGA CCATGAAGCT GCTGACCACC TTCGCGGGGC TGGACCTGCT TGGCCCGGAT
TTTCGCTGGA AGACCACGGC CTACGCCGAC AGCGCTCCGG TCAACGGCAC GCTCAACGGC
AACCTGTACC TACGTGGCCA GGGCGATCCG AAGCTGATTC CCGAAGAGCT CGTCAAGCTG
GTGACCGACG TGCGCCGCGC CGGCGTGGAT GAACTGGCGG GCAACATCGT GCTGGATCGC
ACCTACTTCG AGGGCGATCT GTCGGAAGCA CCGCCGCTGG ACGGCGACAG CGCGCGTGCC
TACAACGTCG CGCCCGACGC GCTGCTGTAT TCATTCAAGA CGCTCACGTT CACGCTCTCG
CCGGATGCCG GCAACGGCGC GGTCAACATC GATGTATCAC CGCCGCTGGC GCAGTTGCAG
ATCGATAACC AGTTGCGCAC CACGCGCGGC GGCTGCGGCG ACTGGAAGAC GACCTCCGGC
GCCAACATCT CCACGCAGAC CGACGGCCAC GTCATAGCCA GCTTCGACGG CCGCTATGCC
GCCGCGTGCG GCGAACGCGT CTTCAATATC GCCGCGCTCA CGCATGCCGA CTTCATCTGG
GGTGGCTTCC TGGCGCTATG GCAGCAGGCC GGTGGCACGA CGCGTTTCAC GCCGGGCTTG
CGCGAAGGCA AGGTACCGCG TCAGGCCGTT CTGCTGGCCA CGCACTACGG CCCGCCGCTG
TCGGAAGTCG TGCACGACAT CGACAAATAT TCGAACAACG TGATGGCGCG CCAGCTCTTC
CTCACCATCG GCGCGGAAAT CGGGCGCAAG CCCGCATCGG TGCGGCAATC GACCGAGGTC
ATCAACCGCT GGCTCGCCAA ACAGAACCTC ACGATGCCGG AGCTGGTGCT GGAGAACGGT
TCGGGCCTGT CACGCACCGA GCGCATCAGC GCACGCAACA TGGGGCGCCT GCTGCAGCAG
GCCGACGCCA ACCCGAACGG CGGCGTGCTG CGCGATGCGC TACCCGTTGT CGGCGTGGAC
GGCACCATGC GCAATCGCCT GACACGGGCC GGGGTGGCCG GCAATGCCGA GATCAAGACC
GGCACACTCA ACGGCGTGCG CGCCATCGCC GGGTATGTGG AAGGCGAAGA CGGCCAGCGC
TTCGTGGTGG TCAGCATGAT CAACCACCCG AACGCCAGCG GCGGCCAAGC CGCGCACGAT
GCACTGCTGC AATGGATCTA CCAGGGCGCG CCGCGATGA
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| Protein sequence | MARIRPTRLL TLSRSALACA VLLTIAASPL AHAKKAKTQA APRTTAAQTR QAAHNPAGLP
ANVALAFARA HIPLDAVSVF VIRTGTATPI LQWNADAGMN PASTMKLLTT FAGLDLLGPD
FRWKTTAYAD SAPVNGTLNG NLYLRGQGDP KLIPEELVKL VTDVRRAGVD ELAGNIVLDR
TYFEGDLSEA PPLDGDSARA YNVAPDALLY SFKTLTFTLS PDAGNGAVNI DVSPPLAQLQ
IDNQLRTTRG GCGDWKTTSG ANISTQTDGH VIASFDGRYA AACGERVFNI AALTHADFIW
GGFLALWQQA GGTTRFTPGL REGKVPRQAV LLATHYGPPL SEVVHDIDKY SNNVMARQLF
LTIGAEIGRK PASVRQSTEV INRWLAKQNL TMPELVLENG SGLSRTERIS ARNMGRLLQQ
ADANPNGGVL RDALPVVGVD GTMRNRLTRA GVAGNAEIKT GTLNGVRAIA GYVEGEDGQR
FVVVSMINHP NASGGQAAHD ALLQWIYQGA PR
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