| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0474 |
|---|
| Symbol | sucC |
|---|
| ID | 6288968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 507584 |
|---|
| End bp | 508750 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642624039 |
|---|
| Product | succinyl-CoA synthetase subunit beta |
|---|
| Protein accession | YP_001898061 |
|---|
| Protein GI | 187927574 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCC ATGAGTACCA AGGCAAGGAA ATCCTGCGCA AATACAATGT GCCGGTTCCG
CGCGGCATTC CGGCCTTCTC GGTCGACGAG GCCATCAAGG CTGCTGAAAC CCTGGGCGGC
CCGGTGTGGG TCGTGAAGGC GCAGATTCAT GCGGGTGGCC GTGGCAAGGG CGGTGGCGTG
AAGGTTGCCA AGAGCATCGA GCAGGTCAAG GAATACGCCA GCAGCATCCT GGGCATGACG
CTGGTGACGC ACCAGACCGG TCCGGAAGGC AAGCTGGTCA AGCGCCTGCT GATTGAAGAA
GGCGCGGACA TCAAGAAGGA ACTGTACGTG TCGCTGGTGG TGGACCGTGT GTCGCAGCAA
GTGGCGCTGA TGGCCTCCAG CGAAGGCGGC ATGGACATCG AAGAAGTCGC CGAATCGCAC
CCGGAAAAGA TCCACACGCT GTTGATCGAT CCGCAAGCCG GTCTGCAAGA CGCCCAGGCT
GACGACATCG CCCGCAAGAT CGGCGTGCCC GACGCGAGCG TGCCGCAAGC CCGCCAAGCC
CTGCAGGGCC TGTACAAGGC ATTCTGGGAA ACCGACGCTT CGCAAGCTGA AATCAACCCG
CTGATCCTGA CCGGCGACGG CAAGGTCATC GCGCTGGACG CCAAGTTCAA CTTCGACTCG
AACGCGCTGT TCCGTCACCC GGAAATCGTG GCGTACCGCG ATCTGGATGA AGAAGACCCG
GCCGAAATCG AAGCCTCGAA GTTCGACCTG GCCTACATCT CGCTCGACGG CAACATCGGC
TGCCTGGTGA ACGGCGCCGG TCTGGCCATG GCCACGATGG ACACCATCAA GCTGTTCGGC
GGCGAGCCGG CCAACTTCCT CGACGTGGGC GGCGGTGCCA CCACCGAGAA GGTGACCGAA
GCCTTCAAGC TGATGCTGAA GAACCCGGAC GTGAAGGCCA TCCTGGTCAA CATCTTCGGC
GGCATCATGC GTTGCGACGT GATCGCCGAA GGCGTGATCG CGGCAGCAAA GGCTGTGTCG
CTGTCGGTGC CGCTGGTTGT GCGCATGAAG GGCACCAACG AAGACCTCGG CAAGAAGATG
CTGGCCGACT CGGGTCTGCC CATCATCGCC GCAGACACGA TGGCAGAGGC CGCCGAGAAG
GTCGTGGCCG CAGCCGCCGG CAAGTAA
|
|---|
| Protein sequence | MNIHEYQGKE ILRKYNVPVP RGIPAFSVDE AIKAAETLGG PVWVVKAQIH AGGRGKGGGV
KVAKSIEQVK EYASSILGMT LVTHQTGPEG KLVKRLLIEE GADIKKELYV SLVVDRVSQQ
VALMASSEGG MDIEEVAESH PEKIHTLLID PQAGLQDAQA DDIARKIGVP DASVPQARQA
LQGLYKAFWE TDASQAEINP LILTGDGKVI ALDAKFNFDS NALFRHPEIV AYRDLDEEDP
AEIEASKFDL AYISLDGNIG CLVNGAGLAM ATMDTIKLFG GEPANFLDVG GGATTEKVTE
AFKLMLKNPD VKAILVNIFG GIMRCDVIAE GVIAAAKAVS LSVPLVVRMK GTNEDLGKKM
LADSGLPIIA ADTMAEAAEK VVAAAAGK
|
|---|
| |