Gene Rpic_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0425 
Symbol 
ID6287224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp455854 
End bp456186 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content64% 
IMG OID642623991 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_001898014 
Protein GI187927527 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0839073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000787974 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCAGGG CTTCTCATAT CTTGGGCGAG GCCGGCGTGC CGCTTGTCAA TCTCAATGCC 
GAGGCCGACG CGCTGCCGCG CGCATGGTCG TCTCGCGTGC TGGAACGTTT TGGTGGCGGC
AACTTCAAGG TGCTGCGCAT GGATGGCACG CCGTATCCCA ACGAGGTGCA CGGCTATGCC
GAAGGGTTAC TGGTCATCGA TGGGCAGCTG CGTTTGCGTA TCGGCGACGA AGCGGTAACC
GTTTCGCGCG GCGAGCTGTA TGTGGTGCCT GCCGGCGTGC CGCACAGCGT GGACGCCGGC
AGCGCCGGCA CGCTGGTTAT TCTGGACGTG TAA
 
Protein sequence
MLRASHILGE AGVPLVNLNA EADALPRAWS SRVLERFGGG NFKVLRMDGT PYPNEVHGYA 
EGLLVIDGQL RLRIGDEAVT VSRGELYVVP AGVPHSVDAG SAGTLVILDV