Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0354 |
Symbol | |
ID | 6288910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 377919 |
End bp | 379757 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623921 |
Product | ABC transporter related |
Protein accession | YP_001897944 |
Protein GI | 187927457 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGCT TTCCCGCCTC TTCCGAACCG CCTCCGCCGG GGGCTGCCCG CGGCGACTGG CGCACCATCA AGAGCCTGCT GCCGTATCTA CTGGCCTACA AGTGGCGGGT GGCGCTGGCA CTGTCGTTTC TGATCGCGGC CAAGGTGGCA AACCTCGGTG TGCCGATGGT CATGAAGCGG CTGATCGATG CCATGAACGT GTCGCCGTCC GACCCGCGCG CGCTGCTGGT TGTGCCGGTG GGCATCATCA TTGGTTACGG GCTGCTGCGG CTGTCGACGT CGCTGTTCTC GGAGCTGCGC GAAATCCTGT TCGCGAAGGT CACGGAGAGT TCGGTGCGCA CGCTCGCACT GCAGGTGTTC CGCCATCTGC ACGCGCTGTC GCTGCGCTTT CATCTGGAGC GCCAGACCGG CGGCATGAGC CGCGACATCG AGCGCGGCAC ACGCGGCATC CAGTCGCTCA TCTCGTATTC GCTGTACAGC ATCCTGCCGA CGCTGGTGGA AGTCGGCCTC GTCATCACGT ATTTCTTCGT GAAGTACGAC GTGTGGTTCG CGCTCATCAC GTTTTGCGCG CTGGTCAGCT ACATCGTGTT TACGGTGACG GTGACGAACT GGCGCACGCA CTTCCGCCGC AAGATGAACG AGCTGGATTC GCGCGCCAAC CAGAAGGCGA TCGATTCGCT GCTGAACTTT GAAACGGTCA AGTACTTCGG CAACGAAGAC TACGAAGCAC GTCGCTACGA CGAGAACCTG AAGCACTACC GCGCCGCAGC CATCCGCTCG CAGAATTCTT TGTCGGTGCT GAACTTCGGC CAGCAGCTCA TTGTGGCCAC GGCGCTCATC CTGATCCTGT ATCGCGCCAC GCAAGGTGTG GCGGCGGGGC ACATGACGCT GGGCGACCTC GTGCTGGTCA ACACGCTGAT GCTGCAGATC TACATTCCGC TCAACTTCCT GGGCGTGATC TACCGCGAGC TGAAGCAGGC CGTGACCGAC ATGGACCGCA TGTTCAACCT GCTGCAGACC AACCGCGAAG TCGCCGACAA GCCCGACGCT CCGCCGCTGA CGGTGCATGC GGGCGAAGTG CGCTTCGCGC ATGTCGACTT CAGCTACGAA GCCAATCGCC AGATCCTGTT CGATGTGGAT TTCACGATTC CGGCCGGCAC GACCACCGCC GTCGTTGGGC AGAGCGGCTC GGGCAAGTCG ACCCTGGCGC GCCTGCTGTT CCGCTTCTAT GACGTGAAGT CGGGCGCTAT CCAGATCGAC GGTCAGGACC TGCGCGATGT CACGCAATCG AGCGTGCGCG CTGCCATCGG CATCGTTCCG CAAGACACGG TGCTCTTCAA CGACAGCATC TACTACAACA TTGCTTACGG CCGCCCGGAT GCGAGCCGCG AAGAGGTGAT TGAAGCCGCC CGCGCGGCGC AGATTCACCA CTTTGTCGAA TCGCTGCCCG ACGGCTACGA GACGCAAGTC GGCGAGCGCG GCCTGAAGCT CTCCGGCGGC GAGAAGCAGC GTGTGGCGAT TGCACGCACC TTGCTCAAGC GCCCGCCGAT TCTCGTGTTT GACGAAGCGA CGTCTGCGCT CGACTCGCGC ACCGAGCACG CCATCCAGGA AGAGCTGATG CGCCTGGCGC AGAACCACAC CACGCTGGTC GTTGCGCACC GGTTGTCGAC CATCGTCCGT GCGCACCAGA TTCTGGTGAT GGAGCACGGT CGCATCATCG AGCGAGGCAC GCATGAATCG TTGTTGCGTG CGGAAGGCCG TTACGCGCAG ATGTGGCGCA TGCAGGCACG CGAGCCAGAG CGCGTTGCCG AAGAAGCAGA AGACGCCCGA GCAGGTTGA
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Protein sequence | MRRFPASSEP PPPGAARGDW RTIKSLLPYL LAYKWRVALA LSFLIAAKVA NLGVPMVMKR LIDAMNVSPS DPRALLVVPV GIIIGYGLLR LSTSLFSELR EILFAKVTES SVRTLALQVF RHLHALSLRF HLERQTGGMS RDIERGTRGI QSLISYSLYS ILPTLVEVGL VITYFFVKYD VWFALITFCA LVSYIVFTVT VTNWRTHFRR KMNELDSRAN QKAIDSLLNF ETVKYFGNED YEARRYDENL KHYRAAAIRS QNSLSVLNFG QQLIVATALI LILYRATQGV AAGHMTLGDL VLVNTLMLQI YIPLNFLGVI YRELKQAVTD MDRMFNLLQT NREVADKPDA PPLTVHAGEV RFAHVDFSYE ANRQILFDVD FTIPAGTTTA VVGQSGSGKS TLARLLFRFY DVKSGAIQID GQDLRDVTQS SVRAAIGIVP QDTVLFNDSI YYNIAYGRPD ASREEVIEAA RAAQIHHFVE SLPDGYETQV GERGLKLSGG EKQRVAIART LLKRPPILVF DEATSALDSR TEHAIQEELM RLAQNHTTLV VAHRLSTIVR AHQILVMEHG RIIERGTHES LLRAEGRYAQ MWRMQAREPE RVAEEAEDAR AG
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