Gene Rpic_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0354 
Symbol 
ID6288910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp377919 
End bp379757 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content63% 
IMG OID642623921 
ProductABC transporter related 
Protein accessionYP_001897944 
Protein GI187927457 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCT TTCCCGCCTC TTCCGAACCG CCTCCGCCGG GGGCTGCCCG CGGCGACTGG 
CGCACCATCA AGAGCCTGCT GCCGTATCTA CTGGCCTACA AGTGGCGGGT GGCGCTGGCA
CTGTCGTTTC TGATCGCGGC CAAGGTGGCA AACCTCGGTG TGCCGATGGT CATGAAGCGG
CTGATCGATG CCATGAACGT GTCGCCGTCC GACCCGCGCG CGCTGCTGGT TGTGCCGGTG
GGCATCATCA TTGGTTACGG GCTGCTGCGG CTGTCGACGT CGCTGTTCTC GGAGCTGCGC
GAAATCCTGT TCGCGAAGGT CACGGAGAGT TCGGTGCGCA CGCTCGCACT GCAGGTGTTC
CGCCATCTGC ACGCGCTGTC GCTGCGCTTT CATCTGGAGC GCCAGACCGG CGGCATGAGC
CGCGACATCG AGCGCGGCAC ACGCGGCATC CAGTCGCTCA TCTCGTATTC GCTGTACAGC
ATCCTGCCGA CGCTGGTGGA AGTCGGCCTC GTCATCACGT ATTTCTTCGT GAAGTACGAC
GTGTGGTTCG CGCTCATCAC GTTTTGCGCG CTGGTCAGCT ACATCGTGTT TACGGTGACG
GTGACGAACT GGCGCACGCA CTTCCGCCGC AAGATGAACG AGCTGGATTC GCGCGCCAAC
CAGAAGGCGA TCGATTCGCT GCTGAACTTT GAAACGGTCA AGTACTTCGG CAACGAAGAC
TACGAAGCAC GTCGCTACGA CGAGAACCTG AAGCACTACC GCGCCGCAGC CATCCGCTCG
CAGAATTCTT TGTCGGTGCT GAACTTCGGC CAGCAGCTCA TTGTGGCCAC GGCGCTCATC
CTGATCCTGT ATCGCGCCAC GCAAGGTGTG GCGGCGGGGC ACATGACGCT GGGCGACCTC
GTGCTGGTCA ACACGCTGAT GCTGCAGATC TACATTCCGC TCAACTTCCT GGGCGTGATC
TACCGCGAGC TGAAGCAGGC CGTGACCGAC ATGGACCGCA TGTTCAACCT GCTGCAGACC
AACCGCGAAG TCGCCGACAA GCCCGACGCT CCGCCGCTGA CGGTGCATGC GGGCGAAGTG
CGCTTCGCGC ATGTCGACTT CAGCTACGAA GCCAATCGCC AGATCCTGTT CGATGTGGAT
TTCACGATTC CGGCCGGCAC GACCACCGCC GTCGTTGGGC AGAGCGGCTC GGGCAAGTCG
ACCCTGGCGC GCCTGCTGTT CCGCTTCTAT GACGTGAAGT CGGGCGCTAT CCAGATCGAC
GGTCAGGACC TGCGCGATGT CACGCAATCG AGCGTGCGCG CTGCCATCGG CATCGTTCCG
CAAGACACGG TGCTCTTCAA CGACAGCATC TACTACAACA TTGCTTACGG CCGCCCGGAT
GCGAGCCGCG AAGAGGTGAT TGAAGCCGCC CGCGCGGCGC AGATTCACCA CTTTGTCGAA
TCGCTGCCCG ACGGCTACGA GACGCAAGTC GGCGAGCGCG GCCTGAAGCT CTCCGGCGGC
GAGAAGCAGC GTGTGGCGAT TGCACGCACC TTGCTCAAGC GCCCGCCGAT TCTCGTGTTT
GACGAAGCGA CGTCTGCGCT CGACTCGCGC ACCGAGCACG CCATCCAGGA AGAGCTGATG
CGCCTGGCGC AGAACCACAC CACGCTGGTC GTTGCGCACC GGTTGTCGAC CATCGTCCGT
GCGCACCAGA TTCTGGTGAT GGAGCACGGT CGCATCATCG AGCGAGGCAC GCATGAATCG
TTGTTGCGTG CGGAAGGCCG TTACGCGCAG ATGTGGCGCA TGCAGGCACG CGAGCCAGAG
CGCGTTGCCG AAGAAGCAGA AGACGCCCGA GCAGGTTGA
 
Protein sequence
MRRFPASSEP PPPGAARGDW RTIKSLLPYL LAYKWRVALA LSFLIAAKVA NLGVPMVMKR 
LIDAMNVSPS DPRALLVVPV GIIIGYGLLR LSTSLFSELR EILFAKVTES SVRTLALQVF
RHLHALSLRF HLERQTGGMS RDIERGTRGI QSLISYSLYS ILPTLVEVGL VITYFFVKYD
VWFALITFCA LVSYIVFTVT VTNWRTHFRR KMNELDSRAN QKAIDSLLNF ETVKYFGNED
YEARRYDENL KHYRAAAIRS QNSLSVLNFG QQLIVATALI LILYRATQGV AAGHMTLGDL
VLVNTLMLQI YIPLNFLGVI YRELKQAVTD MDRMFNLLQT NREVADKPDA PPLTVHAGEV
RFAHVDFSYE ANRQILFDVD FTIPAGTTTA VVGQSGSGKS TLARLLFRFY DVKSGAIQID
GQDLRDVTQS SVRAAIGIVP QDTVLFNDSI YYNIAYGRPD ASREEVIEAA RAAQIHHFVE
SLPDGYETQV GERGLKLSGG EKQRVAIART LLKRPPILVF DEATSALDSR TEHAIQEELM
RLAQNHTTLV VAHRLSTIVR AHQILVMEHG RIIERGTHES LLRAEGRYAQ MWRMQAREPE
RVAEEAEDAR AG