Gene Rpic_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0260 
Symbol 
ID6289262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp275471 
End bp276445 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content63% 
IMG OID642623831 
ProductHPr kinase/phosphorylase 
Protein accessionYP_001897854 
Protein GI187927367 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID[TIGR00679] Hpr(Ser) kinase/phosphatase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA CCGGCGTCAT CGCCCAATCG ATCTTTGACG ACAACGCAGC TGATCTGAAG 
CTCTCGTGGG TCGCCGGCCT GGAGGGCGCG GACCGCGCGT TCGACGTGGA CTTCGCCAAG
GAGGCGACGT CTGCAGCCGA CCTGGTCGGG CACTTGAACC TCATCCACCC GAACCGCATC
CAGGTGCTCG GCAAGCCCGA GATCACCTAC TACCAACGCT TGTCGGAAGA AAACCGCAAG
CGCCAGATGG GCGAGTTGAT CCTGCTGGAG CCGCCCTTCC TGGTGGTGGC CGATGGCGTC
GATCCGCCGC CCGATCTGGA ACTGCGCTGC ACGCGCTCGT CCACACCGCT GTTCACGTCA
CCGATTTCCT CGGCTGCCGT CATTGATCAT CTGCGCCTGT ATCTGTCGCG CATCTCGGCG
CCGCGCGTGA CGATGCACGG GGTGTTTCTC GACATCCTCG GCATGGGCGT GCTGATCATG
GGCGATTCGG GTCTGGGCAA GAGCGAGTTG GGCCTGGAAC TGATCTCGCG CGGCCACGGC
CTTGTTGCCG ACGACGCAGT CGACTTCGTG CGGTTGGGGC CGGACTTTAT CGAAGGCCGC
TGCCCGCCGC TGCTGCAGAA TCTGCTGGAA GTGCGCGGCC TGGGCCTGCT CGACATCAAG
ACGATCTTCG GTGAAACGGC GGTGCGCCGG AAGATGAAGA TCAAGCTGAT CGTGCAACTC
GTGCGCCGCA ACGATGGCGA ATTCGAGCGC CTGCCGCTCG ATTCGCAGTA CCTCGATGTG
CTCGGTCTGC CAATCCACAT GGTGAAGATT CAGGTGGCTG CTGGCCGCAA CTTGGCCGTG
CTGGTCGAAG CCGCGGTGCG CAACACCATC CTGCGCCTGC GCGGCATTGA TACGTTGCGC
GACTTCATGG ACCGCCAGCG AGCCGCCATG CAGGCTGAAG CCGCTTCCCA CTCGCCCCAG
GGCCGTCTGC TTTAA
 
Protein sequence
MELTGVIAQS IFDDNAADLK LSWVAGLEGA DRAFDVDFAK EATSAADLVG HLNLIHPNRI 
QVLGKPEITY YQRLSEENRK RQMGELILLE PPFLVVADGV DPPPDLELRC TRSSTPLFTS
PISSAAVIDH LRLYLSRISA PRVTMHGVFL DILGMGVLIM GDSGLGKSEL GLELISRGHG
LVADDAVDFV RLGPDFIEGR CPPLLQNLLE VRGLGLLDIK TIFGETAVRR KMKIKLIVQL
VRRNDGEFER LPLDSQYLDV LGLPIHMVKI QVAAGRNLAV LVEAAVRNTI LRLRGIDTLR
DFMDRQRAAM QAEAASHSPQ GRLL