Gene Rpic_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0189 
Symbol 
ID6289289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp208806 
End bp209543 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID642623760 
Producthypothetical protein 
Protein accessionYP_001897784 
Protein GI187927297 
COG category[S] Function unknown 
COG ID[COG5634] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.992964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAATC ACTACTGCAT GTTCAAGGGC AAGCTGAAAT TCGGCGTGCC CTACCTGGAG 
GGCTACAACG GCAATCCGCA TTACGCCATC GTGCTGGAAG CGCCGGATGG CGCGGACTTT
GTGGTGCTCG CCAATGTGAA ATCCGACTCG AGCATGCCAG GTGCGGGTGC TGCCGGCTAT
CACGTGCTGT ATCAGTGGAC AACGGATCTG CAGTTGCCGA TCACCGCCGA CCTGACTGCG
CTCGCCCCCG GGCTGCACGC AGGCGGCTTC CCACGCCTGG ACTACCTGCG CGACGCCGGG
CTCGTGGACT TCCCGAACAT GCGGCCGATC GCGCTGGACA CCGAAACCGA ACATAACGAC
ATCAACGCGC TCGTTGACGA CATGCTCAAC CTCGACCGCA CCGCCACGCC GATCGACTAC
GTCTACCACG GCAGTTCTGG CGACGACGAC CGTAAAGGCT GGCCGCCGCG CACCGACGTC
ACGGTCTACG GCTTCGGTTT CTTGTTCGAG CCGCAGCACA ACGGACTGCA CGAGACGCAC
ATGAACCAAG GCAACCCGGT CGTGCATACA CCGGGTGTGA AGGACCATTC GCGCGAAAAC
GGCACGCAGC AGGACGGTGC TGTCATCGTG GAAACCGACG GCAAATTTCA GGCGCTGCTG
ATCGCGTTTC AGACGCAGCG GATTCCGACG GATGACCGTG GATATCCGGT GGCGGATGCG
CATCCGATTC CGGGTTGA
 
Protein sequence
MVNHYCMFKG KLKFGVPYLE GYNGNPHYAI VLEAPDGADF VVLANVKSDS SMPGAGAAGY 
HVLYQWTTDL QLPITADLTA LAPGLHAGGF PRLDYLRDAG LVDFPNMRPI ALDTETEHND
INALVDDMLN LDRTATPIDY VYHGSSGDDD RKGWPPRTDV TVYGFGFLFE PQHNGLHETH
MNQGNPVVHT PGVKDHSREN GTQQDGAVIV ETDGKFQALL IAFQTQRIPT DDRGYPVADA
HPIPG