Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0189 |
Symbol | |
ID | 6289289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 208806 |
End bp | 209543 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642623760 |
Product | hypothetical protein |
Protein accession | YP_001897784 |
Protein GI | 187927297 |
COG category | [S] Function unknown |
COG ID | [COG5634] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.992964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAATC ACTACTGCAT GTTCAAGGGC AAGCTGAAAT TCGGCGTGCC CTACCTGGAG GGCTACAACG GCAATCCGCA TTACGCCATC GTGCTGGAAG CGCCGGATGG CGCGGACTTT GTGGTGCTCG CCAATGTGAA ATCCGACTCG AGCATGCCAG GTGCGGGTGC TGCCGGCTAT CACGTGCTGT ATCAGTGGAC AACGGATCTG CAGTTGCCGA TCACCGCCGA CCTGACTGCG CTCGCCCCCG GGCTGCACGC AGGCGGCTTC CCACGCCTGG ACTACCTGCG CGACGCCGGG CTCGTGGACT TCCCGAACAT GCGGCCGATC GCGCTGGACA CCGAAACCGA ACATAACGAC ATCAACGCGC TCGTTGACGA CATGCTCAAC CTCGACCGCA CCGCCACGCC GATCGACTAC GTCTACCACG GCAGTTCTGG CGACGACGAC CGTAAAGGCT GGCCGCCGCG CACCGACGTC ACGGTCTACG GCTTCGGTTT CTTGTTCGAG CCGCAGCACA ACGGACTGCA CGAGACGCAC ATGAACCAAG GCAACCCGGT CGTGCATACA CCGGGTGTGA AGGACCATTC GCGCGAAAAC GGCACGCAGC AGGACGGTGC TGTCATCGTG GAAACCGACG GCAAATTTCA GGCGCTGCTG ATCGCGTTTC AGACGCAGCG GATTCCGACG GATGACCGTG GATATCCGGT GGCGGATGCG CATCCGATTC CGGGTTGA
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Protein sequence | MVNHYCMFKG KLKFGVPYLE GYNGNPHYAI VLEAPDGADF VVLANVKSDS SMPGAGAAGY HVLYQWTTDL QLPITADLTA LAPGLHAGGF PRLDYLRDAG LVDFPNMRPI ALDTETEHND INALVDDMLN LDRTATPIDY VYHGSSGDDD RKGWPPRTDV TVYGFGFLFE PQHNGLHETH MNQGNPVVHT PGVKDHSREN GTQQDGAVIV ETDGKFQALL IAFQTQRIPT DDRGYPVADA HPIPG
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