Gene Rpic_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0117 
Symbol 
ID6288016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp137071 
End bp138150 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content65% 
IMG OID642623688 
Productbiotin synthase 
Protein accessionYP_001897712 
Protein GI187927225 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCA CTCCGCTCAA CTTCGTTCCA AACGCTGCCA AGGCGCCCGT CACGCCCGGC 
CAGGCGCCCG ACGCACGCTG GAGCCGCGAA GCCATCGAAG CACTGTTCGC GCTGCCGTTC
AACGACCTGC TGTTCCAGGC GCAGCAGGTG CACCGCGCCA ACTTTGACGC GAACGCGGTG
CAGCTATCGA CGCTGCTGTC GATCAAGACC GGCGGCTGCC CGGAAGATTG CTCGTACTGC
CCGCAATCGG CGCGCTACGA CACGGGTGTC GAGGCTGAAA AGCTGATGCC GATCGACGCC
GTGCTGGAAG CCGCATCGCG CGCCAAGCAA AACGGCGCAA GCCGCTTCTG CATGGGCGCC
GCGTGGCGCA ACCCCAAGCC GCATCAGCTC GATGCCGTGG CCGACATGGT GCGCGGCGTG
AAGGCGATGG GGCTGGAGAC CTGCGTGACG CTCGGCATGC TCAAGCAGGA ACAGGCCGCG
CAGTTGAAGG AAGCGGGCCT GGACTACTAC AACCACAACC TCGACACCGC GCCCGAGTTC
TACGGCGAGA TCATCACCAC GCGCACGTAT CAGGACCGGC TCGACACGCT CGAGCACGTG
CGTGACGCCG GCATCAACGT GTGCTGCGGC GGCATCGTCG GGCTGGGGGA ATCGGTGCAC
GAGCGTGCGG GTCTGATCGC CGAACTGGCG AACATGGAGC CGTATCCGGA CTCGGTGCCC
ATCAACAACC TGGTGAAGGT GGAAGGCACG CCGCTGGCGG GCAACGAAGA ACTGGACCCG
TTTGATTTCG TGCGCACGAT TGCCGTGGCG CGGATCACGA TGCCCAAGGC GATGGTGCGG
CTCTCCGCTG GCCGCGAGGC GATGGACGAT GCCTTGCAGG CGCTGTGCTT CATGGCGGGC
GCCAACTCGA TCTTCTATGG CGAGAAGCTG CTGACGACGG ATAACCCGGA GGCGGATGCG
GATCGGAAGC TGCTGGCGCG GTTGGGGATG CGGGTGGAGG TGCAGGATCA CATGCACCAT
GAATCGCATG TGGGGGCGCA GTCTTCGCAT TGCCATATCG ACATTACGCC CGCGGACTGA
 
Protein sequence
MQSTPLNFVP NAAKAPVTPG QAPDARWSRE AIEALFALPF NDLLFQAQQV HRANFDANAV 
QLSTLLSIKT GGCPEDCSYC PQSARYDTGV EAEKLMPIDA VLEAASRAKQ NGASRFCMGA
AWRNPKPHQL DAVADMVRGV KAMGLETCVT LGMLKQEQAA QLKEAGLDYY NHNLDTAPEF
YGEIITTRTY QDRLDTLEHV RDAGINVCCG GIVGLGESVH ERAGLIAELA NMEPYPDSVP
INNLVKVEGT PLAGNEELDP FDFVRTIAVA RITMPKAMVR LSAGREAMDD ALQALCFMAG
ANSIFYGEKL LTTDNPEADA DRKLLARLGM RVEVQDHMHH ESHVGAQSSH CHIDITPAD