| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0106 |
|---|
| Symbol | |
|---|
| ID | 6286546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 123421 |
|---|
| End bp | 125040 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642623677 |
|---|
| Product | carboxyl transferase |
|---|
| Protein accession | YP_001897701 |
|---|
| Protein GI | 187927214 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCGC TTGAATCGCG CATCGTGCCG CAGAGCGACG CGTATCGGCA GAACCATGCC
GCGCTCACGG AACTCGTCGG CCGGTTGCGC ACGTTGGAAG ATCGCACACG CGACAAGTCC
GAAGCCTCGC GCGCCCGCTT CGAGCAGCGC GGTCAACTCC TGCCGCGCGA CCGGCTTGGC
CGCCTGCTCG ACGCCGGCGC GCCGTTTCTT GAGCTATCCA CGCTGGCGGG CTTTTGCCTC
GACCACGCAG ACCCGGCGCG CTCGATTCCT GGCGGCGGCT TCATCGCGGG CATCGGCTGG
GTGAGCGGTG TGCGCGCGAT GATCATTGTC GACGACGCGG GCATCGACGC AGGGGCCGTG
CAGCCGATGG GCATCGAGAA GTTCCAGCGT GCCCAGGCCA TTGCGCTGGA GCAGAAGCTG
CCGTTCATCC ACCTTGTCGA ATCGGCCGGC GCCAACCTGC TGACGTATCG CGTGGAGACC
TTCATCCACG GCGGCAGCGG CTTTTACTGG CTCGCGCGGC TGTCGGCGGC GGGCATTCCG
GTGATCAGCG TGGTGCATGG GTCCAGCACG GCGGGCGGCG CCTACATGCC GGGCCTGTCG
GACTACGTGG TGATGGTGCG CGACCGGGCG CGCGCGTTCC TCGCCGGGCC GCCGTTGCTG
AAAGCGGCCA CGGGCGAGAT CGCCACCGAA GAGGAACTGG GCGGTGCGGA GATGCACGCC
ACCACTTCGG GCCTGGCCGA ATACCTGGCC GAAGACGATG CGGATGCACT GCGCATCGCG
CGCGAACTTG TGGCCGCGCT CGACTGGAAC CGCGATGTGC CGGCACCGGA CAGGCCCTAT
GCGCCGCCGC GCTTCGATGC AGAAGAACTG CTTGGCATTG CGCTGACCGA TCATCGCAAA
CCGCTGGACA TGCGCGAGGT CATTGCACGC TTTGCCGATG GATCGGATTT TCTGGAGTTC
AAGCCTGACT ATGGCCCCGG CACGATCACG GGGCATGCGG CCATCTGTGG CATGCGCGTC
GGCGTCATCA CAAACAACGG GCCGCTGGAC CCGGCGGGCG CGACCAAGGT GGTGCATTTC
ATTCAGGTGT GCTGCCAGTC CGACACGCCG CTGCTGTATC TGCAAAACAC CACCGGTTTC
ATCGTCGGCA AGGCGTCGGA ACAGGCCGGC ATGATCAAGC ACGGCTCGAA GACGATCCAG
GCCATGGCCA ACGCCACCGT GCCGCGCATC ACCGTGCATT GCGGCGCGTC GTTTGGCGCG
GGCAACTACG GCATGTCGGG GCGCGGCTTC TTTCCGGATT TTTGCTTCAG CTGGCCCAAC
GCCAAGACGG CTGTGATGGG CGCCGAGCAG GCCGCCGGAA CGATGGCGAC GGTCATGGCC
GCGAGCATGC AACGCAAGAC GCAGACCGTC GACCATGACG CCATTGAAGC GATGCGCGCC
AAGGTGATCG ACACGTTCGA GCGGCAGTCC GATGCATTCA CCGTTTCGGG CCGATTGCTG
GACGACGGCG TGATCGACCC GCGCGACACA CGCAAGGTGC TGGCCTGCGT GCTCGGGGTG
TGCGACGAAG CGCGCCGCCG CACGTTGCAT CCGATCCAGT TTGGCGTTGC GCGCCCGTAG
|
|---|
| Protein sequence | MPALESRIVP QSDAYRQNHA ALTELVGRLR TLEDRTRDKS EASRARFEQR GQLLPRDRLG
RLLDAGAPFL ELSTLAGFCL DHADPARSIP GGGFIAGIGW VSGVRAMIIV DDAGIDAGAV
QPMGIEKFQR AQAIALEQKL PFIHLVESAG ANLLTYRVET FIHGGSGFYW LARLSAAGIP
VISVVHGSST AGGAYMPGLS DYVVMVRDRA RAFLAGPPLL KAATGEIATE EELGGAEMHA
TTSGLAEYLA EDDADALRIA RELVAALDWN RDVPAPDRPY APPRFDAEEL LGIALTDHRK
PLDMREVIAR FADGSDFLEF KPDYGPGTIT GHAAICGMRV GVITNNGPLD PAGATKVVHF
IQVCCQSDTP LLYLQNTTGF IVGKASEQAG MIKHGSKTIQ AMANATVPRI TVHCGASFGA
GNYGMSGRGF FPDFCFSWPN AKTAVMGAEQ AAGTMATVMA ASMQRKTQTV DHDAIEAMRA
KVIDTFERQS DAFTVSGRLL DDGVIDPRDT RKVLACVLGV CDEARRRTLH PIQFGVARP
|
|---|
| |