| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5414 |
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| Symbol | |
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| ID | 8015986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012851 |
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| Strand | - |
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| Start bp | 22134 |
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| End bp | 22862 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644827245 |
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| Product | hypothetical protein |
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| Protein accession | YP_002978445 |
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| Protein GI | 241258179 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTTT TCTCCTCCAG ATCCACCCCT GAAATGCAAA TTACTCCGCC GCCCGGAACT
GGCCAGGGCG TCCGTGGATG GTTTGCTGCG TTTCAGAAAC CAATTCTCGA CAAGCACCTG
GCAACGAAAG TCGCCATTGT GTTCGCGGCT ATCTCCATCG GGCAGACCGT CGCGATCGTC
AGAATTAGCG ATAACTCTGG CCCGAAGCCC TATTTCGTCG AACGCGACAA GCAAAGCGGT
GCCGTCTACT ACAGCGAGAA ATACGCCGAG GCGTTCACCC CGACCGCCGA CAACAACGCC
TATTTCCTGC GCAAGTGGGC TACCCGCGTA TTCACGATCA ACCTGGATGC GCAAGACACC
CTGAAGCGAC AGATCCCGCT TGCACGCACG TGGACCTCCG GTGCCGCAAC CAAGGAGCTC
GACACCTACA TCACTGAAAC CGATCCGGTG GCCCAGCGCG TCGTCAACAC GCCCGGGCTG
ACCCGTCAGT TCGAAGACAA CTCCATATCG TTCTCGGCCG ACGGCAACAT CGCCTACATG
ATCGTCACTC TGACCGAGAG CATTGCCGGC GTTCGCCAGA CGCCCAAGCA GAAGCTGCTC
ACCATCAACT TCCTCACCGC GCCGCAACAA CTCAAGCCGG AAGACAGGAA GGACAACCCG
ATCGGCATGC GCATCACGGG CCTGTCCATT ACTCCGTACA CCGGCATTAC CCCAGGATCG
ACGAAATGA
|
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| Protein sequence | MKLFSSRSTP EMQITPPPGT GQGVRGWFAA FQKPILDKHL ATKVAIVFAA ISIGQTVAIV
RISDNSGPKP YFVERDKQSG AVYYSEKYAE AFTPTADNNA YFLRKWATRV FTINLDAQDT
LKRQIPLART WTSGAATKEL DTYITETDPV AQRVVNTPGL TRQFEDNSIS FSADGNIAYM
IVTLTESIAG VRQTPKQKLL TINFLTAPQQ LKPEDRKDNP IGMRITGLSI TPYTGITPGS
TK
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