| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5380 |
|---|
| Symbol | |
|---|
| ID | 8007877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012849 |
|---|
| Strand | + |
|---|
| Start bp | 270368 |
|---|
| End bp | 270889 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644822587 |
|---|
| Product | FMN-binding domain protein |
|---|
| Protein accession | YP_002973847 |
|---|
| Protein GI | 241114372 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.17391 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGGA CTCCCATGGC GGCAGTGCCG CTTGCGGTGC TGGTCGTGCC CGTCCAAGCG
ACGGAATACC TGACAGTTCA ACAGGCTCAG GCGCAGATGT TTCCTGGCGC GAGTTTTCAG
GCCGTGCCTC TCCAGATTAC GGACCAGATT CGCGAAACAT TGAACGAGCG CTCCGGGGTA
CACGAGCCAT TCAATGACAA GGGGGTCTGG AAAGTGTCGA CTGGCGGCTG GTTCATCGTG
GATCGCGTGG TGGGCAAGCA TGAAAAAATC ACGTATGCCG TGGCGCTCGA CGCCAAGGGA
GCCGTGCGCG CCGTCGATAT CCTGACGTAC CAGGAAACGT ATGGCTATGA GGTGCGCAAT
GCCGACTGGC GTGCCCAGTT TGTTGGTAAG ACCGCGCAGG ATGCTGTGCA GCTTGGTAAA
GACATCCGTA ACATCAGTGG CGCGACGCTC TCATGCAAAC ACATCACCCA GGGAGTCAAG
CGGGTGCTGG CTGTGTATGA CCTCTTACTA GCCAAGATGT GA
|
|---|
| Protein sequence | MKWTPMAAVP LAVLVVPVQA TEYLTVQQAQ AQMFPGASFQ AVPLQITDQI RETLNERSGV
HEPFNDKGVW KVSTGGWFIV DRVVGKHEKI TYAVALDAKG AVRAVDILTY QETYGYEVRN
ADWRAQFVGK TAQDAVQLGK DIRNISGATL SCKHITQGVK RVLAVYDLLL AKM
|
|---|
| |