Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5309 |
Symbol | |
ID | 8007806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012849 |
Strand | + |
Start bp | 200361 |
End bp | 200861 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644822519 |
Product | protein of unknown function DUF477 |
Protein accession | YP_002973779 |
Protein GI | 241114304 |
COG category | [S] Function unknown |
COG ID | [COG3762] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0729958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA TCAAGCGAAT TCTTTCCCAT CTACTGACGA CGCACTGGCG CGTCAGGCGA GCGTTCCCGC GCAAGGCGAT GCGGGCCATC GGGCAAGCGA TCGCTCAAAG CGAGTCGTCC CATGTCGGGC ATCTGTGCTT TGCCGTGGAA GGCGCGTTGA GCTTCTCTGC GCTATGGAAG GGGGTGACGG CGCGGGAACG GGCTCTTGAA GTCTTTTCGC AACTGCGTGT GTGGGACACA GAGCAGAACA ACGGCGTCCT GATTTATCTA TTGCTGGCGG ACCGCAGTGT CGAGATCGTT GCCGACCGTG GCATTCACGC GCGGGTTGGT GCTCAAGGAT GGCAGGCGAT CTGCAGCCAG ATGGAAGCCG CGTGTCGGCG CGCCGAATAT GAGCGCGGTG TGATCGACGG GATACGATCC ATCACGCTGC GCCTGACGCA GCATTTCCCG GCGCGCGACC GGCGCGAGCA GAGGTTGCCC GGCAAGCCGG TCATCCTGTG A
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Protein sequence | MENIKRILSH LLTTHWRVRR AFPRKAMRAI GQAIAQSESS HVGHLCFAVE GALSFSALWK GVTARERALE VFSQLRVWDT EQNNGVLIYL LLADRSVEIV ADRGIHARVG AQGWQAICSQ MEAACRRAEY ERGVIDGIRS ITLRLTQHFP ARDRREQRLP GKPVIL
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