Gene Rpic12D_5309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5309 
Symbol 
ID8007806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp200361 
End bp200861 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content62% 
IMG OID644822519 
Productprotein of unknown function DUF477 
Protein accessionYP_002973779 
Protein GI241114304 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0729958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA TCAAGCGAAT TCTTTCCCAT CTACTGACGA CGCACTGGCG CGTCAGGCGA 
GCGTTCCCGC GCAAGGCGAT GCGGGCCATC GGGCAAGCGA TCGCTCAAAG CGAGTCGTCC
CATGTCGGGC ATCTGTGCTT TGCCGTGGAA GGCGCGTTGA GCTTCTCTGC GCTATGGAAG
GGGGTGACGG CGCGGGAACG GGCTCTTGAA GTCTTTTCGC AACTGCGTGT GTGGGACACA
GAGCAGAACA ACGGCGTCCT GATTTATCTA TTGCTGGCGG ACCGCAGTGT CGAGATCGTT
GCCGACCGTG GCATTCACGC GCGGGTTGGT GCTCAAGGAT GGCAGGCGAT CTGCAGCCAG
ATGGAAGCCG CGTGTCGGCG CGCCGAATAT GAGCGCGGTG TGATCGACGG GATACGATCC
ATCACGCTGC GCCTGACGCA GCATTTCCCG GCGCGCGACC GGCGCGAGCA GAGGTTGCCC
GGCAAGCCGG TCATCCTGTG A
 
Protein sequence
MENIKRILSH LLTTHWRVRR AFPRKAMRAI GQAIAQSESS HVGHLCFAVE GALSFSALWK 
GVTARERALE VFSQLRVWDT EQNNGVLIYL LLADRSVEIV ADRGIHARVG AQGWQAICSQ
MEAACRRAEY ERGVIDGIRS ITLRLTQHFP ARDRREQRLP GKPVIL