Gene Rpic12D_5275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5275 
Symbol 
ID8007980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp158623 
End bp159900 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content62% 
IMG OID644822485 
Producthypothetical protein 
Protein accessionYP_002973745 
Protein GI241114270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0969359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCAA TCCCAACCCA CCCAGGCTTC GCGACCCCGC GCAGCATAAT TGAGGAGCGG 
CCCCTGCGGC CGCCCGTCAT TGGAAAGATC CGCCCTGGCA TCAAGGTCCT CACCAAGAAG
GCCAGGGAGA ATCCCCAAGC CGTCCAGATT CACGACGCGC TTCTCGCCCA AGGGCTCTCG
TTCGAGGACA TCGGTTCCGA GATCGAACGA AAAACCGGCC TGAGCTACGC CCTCATCCCC
CGCAATACGC CGTACTTCAC GTGTCGTGGC AGTGATTTCA CGAATCCTGC CATCGCGGAA
GAGATCCTGA CCCGATACGG GGAGGATCGC GGTGACGGCC TCAAGCTCTG GCGCTTTCCG
GTCGTCTTTG CGTTCGACGA CTGGTTGCGC AACATCCCCA ACGAGCTGGC GGTATTCAAC
GGCACGGGAA AGGTGTTCTG GTCGCAGTAC GGGGCGGATG GTCTTCGTCA ATGCAAGACG
TACGCACCTG TCGAGCGCAG TGACCGCGCC AGGCGTGCAA AGCGCATCTT CGGCGGCCGC
ACCATCATCC TGCGCCAGGA CGACGCCATT CCCGATGGCG TATGCGACCC GCAGGTCTGC
CCGCAATACC AGGACCGACA CTGCAACCTC ACGGCCAGCT TCCTATTTGC GATCCTTGAC
ATTCGAGGCC TTGGCTTGAT TGAGTTGCCC ACCAATTCGA TCTACGTCCT GCAGAAGGCC
CATGCGGCCA TGCAGACTGT GGCGATTGCG CGCGGCGGCC GTCTGGTCGG CACCAGGTTC
TGGCTCTCCA AGCAGGAAGT GGAGATTTCC CGCATCGACG ATAACGGCTT GCCGGTACGC
CAGAAACAAT GGCTCACCAC GCTGGATGCC GAAATCGACC TGGGCGCGCT GCTGGATGGC
GCTGACCATA TTGGTGCTGC GATCGAGGTG GGTACGCAGA CGGTTGCCCT GCTGGAGCAC
CCCACGACCG AGCCGGCCGC CACTGCCACG CCAACGTCAG GCGAGGAGGG TGGTCAGCCA
GGAGCGCAGA GCGAGCCGCC TGTCGGCGGC TCTATCGCCG AGCAGTTTGA ACGTCTCATC
GTGGCGCTGG GCATGGAGGG GCAGGAAACG CGCGAGCATT TGCGCGTGTA CGCACACTCC
AAGTTTGGCA AGGGCTGGAC CAAGCGCGAG CAGGACATGC GAGCGCTGAT CGATGAGATG
GGTGTGGCTC TCGTGTCTCC TCCCGCCTTC CGCGAGAAGG TGAAAGCGGA GTTCGATGGC
AGTCTGTTCT CAGCTTGA
 
Protein sequence
MHAIPTHPGF ATPRSIIEER PLRPPVIGKI RPGIKVLTKK ARENPQAVQI HDALLAQGLS 
FEDIGSEIER KTGLSYALIP RNTPYFTCRG SDFTNPAIAE EILTRYGEDR GDGLKLWRFP
VVFAFDDWLR NIPNELAVFN GTGKVFWSQY GADGLRQCKT YAPVERSDRA RRAKRIFGGR
TIILRQDDAI PDGVCDPQVC PQYQDRHCNL TASFLFAILD IRGLGLIELP TNSIYVLQKA
HAAMQTVAIA RGGRLVGTRF WLSKQEVEIS RIDDNGLPVR QKQWLTTLDA EIDLGALLDG
ADHIGAAIEV GTQTVALLEH PTTEPAATAT PTSGEEGGQP GAQSEPPVGG SIAEQFERLI
VALGMEGQET REHLRVYAHS KFGKGWTKRE QDMRALIDEM GVALVSPPAF REKVKAEFDG
SLFSA