Gene Rpic12D_5273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5273 
Symbol 
ID8007978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp157126 
End bp157713 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content60% 
IMG OID644822483 
Producthypothetical protein 
Protein accessionYP_002973743 
Protein GI241114268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.153933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCTG CCCAACACCC CCAGGAACTT GAGGCGCCAT TAGGCGCGCC ACAGCCGAGT 
ACATCCAACT CCGGACTCAA GCCGATCGCG CGGCTGGTCG GAGAAAACAG GATTAAGCGG
ATCGTCCCCG AGACGGCCGC CAGTGCTCAA GTCACCTATT CCTCTGTGTA CGTTCGCGAT
TTCCTGCGCT CCGCGTACAA CTTCTGCTCT TCCAAGTTCT CAGTCGCCAG GTCAGGCAAG
ACCCGAGCGC TCGACGAAAA ATTCCGCGAA GCCGAGCTTT GGTTCGAAAA AGCCATCGCG
TGGCACGCGA ACAAAAGCCA AACCCCCATC CCCATCGAGA CCGATACCGT TGAGGTCCAG
GTCACACATC CGCTGTCTGG GCGCCTCATT CGCCTCCTGA ACCAGCACGA CAGGCTGTTC
GCGCTCGCCA TCTTCGCCCG CGTCGCCAAC TCCATATCGG CGCTCGAATT CGAGGGCACG
ATGAAAGTGG CCGGCAGCAA GATCGCTTCA ATCCACCAGA GCTGCATCCC CGACAACGAC
CGTTTCGCTG CTGACGGCGC ACAAGACGGC GACACCCCTG CGGGATAG
 
Protein sequence
MVAAQHPQEL EAPLGAPQPS TSNSGLKPIA RLVGENRIKR IVPETAASAQ VTYSSVYVRD 
FLRSAYNFCS SKFSVARSGK TRALDEKFRE AELWFEKAIA WHANKSQTPI PIETDTVEVQ
VTHPLSGRLI RLLNQHDRLF ALAIFARVAN SISALEFEGT MKVAGSKIAS IHQSCIPDND
RFAADGAQDG DTPAG