| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5138 |
|---|
| Symbol | |
|---|
| ID | 8007718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012849 |
|---|
| Strand | + |
|---|
| Start bp | 38628 |
|---|
| End bp | 39413 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644822352 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002973612 |
|---|
| Protein GI | 241114137 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.187307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.615211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCAAC GTCTTGCCCG GCCGCTGCTC GCGGTGGGCC TGCTCCTCTC CGCCGCGGCC
GCCTGGGCGC ACGGCATCTC CGAGGCCGAC AAGCAGCGCA TGCTGGATGG CGGCTACCTG
CAGTACATCG GGCTGGGCGC CAGCCACATG CTGACCGGCT ACGACCACCT GTTGTTCCTG
TTCGGTGTGG TGTTCTTCCT CACGAAGTTC ACCGATGTGG CCAAGTTCGT CACGGCGTTC
ACGCTGGGCC ACTGCATCAC GCTGATCTTC GCGACGTTCC TGAAGATCAC CTGGAACTTC
TGGCTCGTGG ATGCACTGAT CGCGATCAGC GTCATCTACA AGGGGTTCGA CAACAACGGC
GGCTTCCAGA AGTACTTCAA CCGCCCGTCG CCCAACCTAC TGCGTGTCGT CTTCGCCTTC
GGGCTGCTGC ACGGTTTCGG CCTGTCCACC CGCCTGCAGC AACTGCCGCT GGGCGACGAC
AACTTCAGCA TGCTGATGCG GATCCTGAGC TTCAACGTCG GCGTTGAGAT CGGGCAGATC
GCCGCTCTCG TGGTCATGGT CGCCCTGCTG TCCCTGTGGC GCAAGCGTGA GTCGTTCCAG
CGGTTCAGCA CGTTCTCGAA CAACGCACTG ATGACGCTCG GCGCGCTGTT GCTGTTGATG
CAACTGCACG GCTACCACCA CGACTTCGAT GCAGAGAACC TGCGCTTCCC CGAGGAGGAG
CACAAGCACC TGCATGAAGA CATGGACATC GACAAGAGCA CCCGCACGGG ACGCGAGAGC
CTCTGA
|
|---|
| Protein sequence | MFQRLARPLL AVGLLLSAAA AWAHGISEAD KQRMLDGGYL QYIGLGASHM LTGYDHLLFL
FGVVFFLTKF TDVAKFVTAF TLGHCITLIF ATFLKITWNF WLVDALIAIS VIYKGFDNNG
GFQKYFNRPS PNLLRVVFAF GLLHGFGLST RLQQLPLGDD NFSMLMRILS FNVGVEIGQI
AALVVMVALL SLWRKRESFQ RFSTFSNNAL MTLGALLLLM QLHGYHHDFD AENLRFPEEE
HKHLHEDMDI DKSTRTGRES L
|
|---|
| |