| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5111 |
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| Symbol | |
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| ID | 8007897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 14305 |
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| End bp | 15042 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644822329 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002973589 |
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| Protein GI | 241114114 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.013919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACT CCTGGGATTG GCTCATTTAC TTCAAGCCAT CGGTGACGGG CGAAGGGCTG
TATGGAGCGA TGCTCCTGAC AGGCCTGGGT TGGACCCTGC TGATCTCGCT GTTGTCCTGG
ACGTTGGCGC TGGCCTTGGG CACCCTCTTC GGTGTCGCCC GCACGCTGCC GCAGCGCTGG
GTTCGATGGC CAAGCGCTGC GTATGTGCAT TGCTTTCGCA ACACGCCGCT GCTGGTCCAG
CTCTTCCTGT GGTTCTACGT ACTTCCCGAG CTGCTACCCG TCGACTGGGG CAATGCCATC
AAGCAGATGA ATCCGACGCT GAATCAGTTT CTGACCGTTG TCCTGTGTCT GACGCTCTAT
TCCGCAGCCA AATGCGCCGA GCAGATTCGG GCAGGAATTG AATCGATCGC TGCGGGCCAG
CGGGCCGCAG GGTTGGCGCT GGGGCTTTCC ACCGGCGGCA TCTACCGCCA CGTCATTCTG
CCGCAGGCCT TCCGCATCAT CATTCCGCCT CTGACCTCTG ACTTCATGAA TGTGTTCAAG
AACTCGGCGG TTGCGCTCAC CATCGGGCTC ATGGAGTTGA CCGGCCAGAG CCGCCAACTG
AGCGAATTCA GTGCACAGCC ATTCGAGTCG TTTCTGGCCG CCACCGTCAT CTATATGTTG
GTCACGCTGC TGGTGGTCTG GCTGATGCAC GTGATCGAAG CGCGCTCGCG CCTTCCTGGC
ATGGTCGGTT CGCACTGA
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| Protein sequence | MNYSWDWLIY FKPSVTGEGL YGAMLLTGLG WTLLISLLSW TLALALGTLF GVARTLPQRW
VRWPSAAYVH CFRNTPLLVQ LFLWFYVLPE LLPVDWGNAI KQMNPTLNQF LTVVLCLTLY
SAAKCAEQIR AGIESIAAGQ RAAGLALGLS TGGIYRHVIL PQAFRIIIPP LTSDFMNVFK
NSAVALTIGL MELTGQSRQL SEFSAQPFES FLAATVIYML VTLLVVWLMH VIEARSRLPG
MVGSH
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