Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5051 |
Symbol | |
ID | 8017340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 333319 |
End bp | 334209 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644828739 |
Product | mucin-associated surface protein |
Protein accession | YP_002979939 |
Protein GI | 241589914 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.160501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGCC AAGGGATTTC CTACGAGCAG GTAGCTGCCG CCGCCGACGC ACTTGTCTCC GAGCAGCTGA AGCCAACGCT GAGCGCACTG CGGGAGCGCC TGGGCAGCGG AAGCATGAAC ACGATCCACC GCCATCTGAG CACCTGGCAG GGTCAGCAGA AGCCGGCAGC GCGCAAGCTT GGAGAGGTAA ACCCGCGCGT GCTGGCCGCG TTGGGAGCCG AGATATCGAG GGCGGCCGAT GATGCTGTGG CCGATGCGGA GGCTGCCCTA GCGCAGGCTA TGGCGGAGAA CGCCATGCTT GCCAGCATCG GTGAGGCGCT CGAAGCCGAA CGCGATGCCT TGACGCAGGA GTTGCAACAG GTGGCCACAG AACGCGACAA ACTCGCCGGA AAGGCCGCCG AACAGGCCGC TGAAATTGAC CGCCTGAACG CGGAAGCAGA ACGGGAACGC GCGGAGCTTG CATCTGTGCG ACGCGCGCTC ACACAGGTGG AGCTGCGTTT GGAAGCTGTG CCCCTCTTGG AGCGGGACCT CAGCGAGCAA CGTACGCTAC TGGCTACAGA GCAGTCCGCC CGGGTCGCCG CCGATCGCGC GGCCGCCGTC GCAGAAGCAC AGCGTGACGC TGCCGATACC GCGCGCATGC AAGCCGACGA ACGTTTGACG CAAGCCGAAT CGCGCGAAAG CCAGGTGCGC ACGCAATTGT CGGAGGCTCA GGCCGCCCAC GAACTTACCC GGGAAAAACT GACCGAAGTC GTCGGTCTTG AAGCCGGGGC ACGGGCTGAG TTGCGAATGG TGCGTGAGCA AGTCGAAGCT CTCAAGCCCA CACCGGAGCC GGCGCCCCGC GAGCGGGCCG CTCCAACATC GAGCAAAGCT GTTCCGCGTA GCAAAGGATA G
|
Protein sequence | MARQGISYEQ VAAAADALVS EQLKPTLSAL RERLGSGSMN TIHRHLSTWQ GQQKPAARKL GEVNPRVLAA LGAEISRAAD DAVADAEAAL AQAMAENAML ASIGEALEAE RDALTQELQQ VATERDKLAG KAAEQAAEID RLNAEAERER AELASVRRAL TQVELRLEAV PLLERDLSEQ RTLLATEQSA RVAADRAAAV AEAQRDAADT ARMQADERLT QAESRESQVR TQLSEAQAAH ELTREKLTEV VGLEAGARAE LRMVREQVEA LKPTPEPAPR ERAAPTSSKA VPRSKG
|
| |