Gene Rpic12D_5051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5051 
Symbol 
ID8017340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp333319 
End bp334209 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content65% 
IMG OID644828739 
Productmucin-associated surface protein 
Protein accessionYP_002979939 
Protein GI241589914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.160501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCC AAGGGATTTC CTACGAGCAG GTAGCTGCCG CCGCCGACGC ACTTGTCTCC 
GAGCAGCTGA AGCCAACGCT GAGCGCACTG CGGGAGCGCC TGGGCAGCGG AAGCATGAAC
ACGATCCACC GCCATCTGAG CACCTGGCAG GGTCAGCAGA AGCCGGCAGC GCGCAAGCTT
GGAGAGGTAA ACCCGCGCGT GCTGGCCGCG TTGGGAGCCG AGATATCGAG GGCGGCCGAT
GATGCTGTGG CCGATGCGGA GGCTGCCCTA GCGCAGGCTA TGGCGGAGAA CGCCATGCTT
GCCAGCATCG GTGAGGCGCT CGAAGCCGAA CGCGATGCCT TGACGCAGGA GTTGCAACAG
GTGGCCACAG AACGCGACAA ACTCGCCGGA AAGGCCGCCG AACAGGCCGC TGAAATTGAC
CGCCTGAACG CGGAAGCAGA ACGGGAACGC GCGGAGCTTG CATCTGTGCG ACGCGCGCTC
ACACAGGTGG AGCTGCGTTT GGAAGCTGTG CCCCTCTTGG AGCGGGACCT CAGCGAGCAA
CGTACGCTAC TGGCTACAGA GCAGTCCGCC CGGGTCGCCG CCGATCGCGC GGCCGCCGTC
GCAGAAGCAC AGCGTGACGC TGCCGATACC GCGCGCATGC AAGCCGACGA ACGTTTGACG
CAAGCCGAAT CGCGCGAAAG CCAGGTGCGC ACGCAATTGT CGGAGGCTCA GGCCGCCCAC
GAACTTACCC GGGAAAAACT GACCGAAGTC GTCGGTCTTG AAGCCGGGGC ACGGGCTGAG
TTGCGAATGG TGCGTGAGCA AGTCGAAGCT CTCAAGCCCA CACCGGAGCC GGCGCCCCGC
GAGCGGGCCG CTCCAACATC GAGCAAAGCT GTTCCGCGTA GCAAAGGATA G
 
Protein sequence
MARQGISYEQ VAAAADALVS EQLKPTLSAL RERLGSGSMN TIHRHLSTWQ GQQKPAARKL 
GEVNPRVLAA LGAEISRAAD DAVADAEAAL AQAMAENAML ASIGEALEAE RDALTQELQQ
VATERDKLAG KAAEQAAEID RLNAEAERER AELASVRRAL TQVELRLEAV PLLERDLSEQ
RTLLATEQSA RVAADRAAAV AEAQRDAADT ARMQADERLT QAESRESQVR TQLSEAQAAH
ELTREKLTEV VGLEAGARAE LRMVREQVEA LKPTPEPAPR ERAAPTSSKA VPRSKG