6 homologs were found in PanDaTox collection
for query gene Rpic12D_4928 on replicon NC_012855
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012855  Rpic12D_4928  hypothetical protein  100 
 
 
155 aa  320  4e-87  Ralstonia pickettii 12D  Bacteria  normal  0.936975  normal 
 
 
-
 
NC_008607  Ppro_3755  hypothetical protein  27.95 
 
 
226 aa  60.8  0.000000007  Pelobacter propionicus DSM 2379  Bacteria  normal  0.473381  n/a   
 
 
-
 
NC_007410  Ava_B0329  hypothetical protein  29.61 
 
 
130 aa  52  0.000003  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00304499  n/a   
 
 
-
 
NC_013216  Dtox_3920  hypothetical protein  26.92 
 
 
137 aa  51.2  0.000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.879955  normal  0.416027 
 
 
-
 
NC_011894  Mnod_3592  hypothetical protein  32.68 
 
 
146 aa  48.5  0.00003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1551  hypothetical protein  28.67 
 
 
130 aa  43.5  0.001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.646726  normal 
 
 
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