| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4698 |
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| Symbol | |
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| ID | 8017276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | + |
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| Start bp | 29091 |
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| End bp | 31772 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644828390 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002979590 |
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| Protein GI | 241589565 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.644067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA AAGCATTGGC AGTCGCCATC AAGAAGATCG TCTGGGCGCA GTTGGTGTTG
TCGGCCGCAC TTGCCGTGCC GGCGTTTGCG CAGAGTCAAC CCGTCGCCTC CGAAGGTCCG
TCGTCCGAAT CGGCCCTGGG CAGCACACCG GCAATCACTG GCCAGGTAGT CACGCCCACC
GCGCCGGCGT CAGGTACGCA GACGCCAAAA CCTGCCACGT CAACTTCCGG TACGGAGATC
ACTGGCCCAT CGGACAACAA GGTTGCGCAG TTGAAGAAGT TTGAAGTGAC AGGTTCGCTG
ATTCGCAGCT CGGACAAGAC GGGCTTCAAT CAAGTCCAAA CGGTCACGCA GAAGGAGATG
CTTAACAGCG GGGCCACCAC GGTCTCGGAT TTTCTCCGTG GCACGAGCGC CAACTCGGGA
AGCAGTTGGG GGGAAGACAC GGTGCTGAGC CAGTCGCCGG GCGGCACGGG TATTGCACTG
CGCGGCATGA GCGAGAAGTA CACCCTCGTG CTGGTGGACG GCCAGCGCGC CGCGCCGTAC
GCCTTCGCAA ACGGCGGCAC CGACACGTTC TTCGATGTCA ACACGCTACC GTTGAACATG
ATTGACCGCA TCGAGATCGT CAAGACGGGC GCTGTGTCGC AGTACGGCTC GGATGCGATT
GCGGGTGTGG TCAATGTCAT CACGAAGAAG AACTTCCAGG GCCTTCAGCT TGACGCAAGC
GCGGGCGGCG CCCAGCACGG TGGCGAGGGC ACAACGAGCT TCAGCATGTT GGGTGGCTTT
GGCAATCTCA ACTCGGATCG CTTCCATGTG ACGGCAGCGC TCAGCCACTA CCGCTCCAGT
GGCGTTTCCA TGTCGCAGCG GGATTTCGCG CGCAACGAGA ACTACGCTGC GCTGCCAGGC
GGATACTTCT CTCAGCCCAG CTCTTTCTTC ATGACGCCTT CTGGCCCGCA GGCGCTGAGC
CCCTGCGGAC CTACAGGAAC GGTCACCTCC GCGCTCAACA ATCTGCAAAC AAAGTCTGAC
GGTACGGTCT GCTCTCAAAA CGGCGCGAGT GGACAATCGC TCGCAGCGCA GACAGAGCGC
ACCAGTGCCA AGGTGCACGC CACCTTCAAG GTCAGCGATA ACGTCGAGGC CTTTGGCGAC
ATCTGGGGCA GCCACAACAC CACGTCGCTC ATGTCCGGCC TGGCTGGCTT TGGAGCAGGC
GCACTCGTGC CTTCGCTTTA CTACACGGGC AGTGAATTTG CTGCGTTCGC TCCCACGGTC
GGCGGAAATG CGCTGACCTA TTACTTCCCG AAAGCGCAGG CGGTGAACAC CACATCCAAC
TTCTATCGTG TGTCGACCGG CATGAAAGGC TCGCTCAGCA CGACGAGATT CGGCGACTGG
GATTGGGCCG CGTCTTATGG GCATTCGCAA AGCGTGGTGT CCAACGCCTA CACAAACCAG
GTCAATGCAT CTGCGGTATT GGGGTACACC GATAGCGTGA CGCCTGCCAC GTTCAGCGCA
GCTACGCTCA ATGGCTTACC TGGTGTGCTG GGTACCTCCT ATAACCAGGG GATCTCGAAG
CTCGATGTGG TGGATGCGAC GATCTCAACC CCGAACCTGT TCAAGCTGCC TGCGGGCGAC
GTAGGGATCG GTCTTGGCGC ACAGTTCCAG CATCAAAGCG AATACATCGG TCCGGGCTCC
ACCGCATTTG TGAACCCGTA CACTCAGGCG GTGGACGGCA ACCGTAATGT CGCCGCGCTG
TACTACCAGG CCGACATTCC GATCGTGCGT GGCCTAACAT TCGGCCAGTC CGGCCGCTAT
GATCGATACA ACGACTTCGG CGGCGTCTAT TCGCCACGCT TTGCACTGCG CTATCAGCCG
GTGCGCGACT TGACCATGTA TGCCTCGTAT AACCGTGGCT TCCGCGCGCC GACGCTGATT
GAGCTCTACC AGGCGGCAGC CGTGACCTAT CAGACCGTCA ACAATCAGAA CGTCAACGAG
TACTTTGTCG GCAATCCGAG CTTACAACCC GAGCGTACGA AGAATTTCAA CATCGGCTTC
CAGTCGTCGC CGACCCGGAC CACGGACTTC GGCCTCGACT ATTACAGGAT CGATGTCAGC
AACGTGATCG GTCAGCCGAA TATCGTCGCA ATGGTTAACG CCAATCCGGG GCAGCCGATG
TACAAGCTCG GGTACACGAA TCTCTCGTAT CTGCGTACCG AGGGTTTCGA AGCCACGTTC
AAGCAGGTGG TACCAACGAC GATCGGCACA TTCACACTGG CGGGTGATTG GGCCTACGTG
TGGCACTTCA CGATGCCGAT GAGCGGGGTC GCGACCGATT TCGCGGGCAA TAACGGCGCA
AACAACACGG TGTTCGGCGG GGCTTTCCCG CGCTGGAAGG GCACCACTGA GCTAAGTTGG
GCTTATCGCA AGTGGACGAC CACTCTTACT TGGAAATACA CCGGTCCCTA CACACAAGTG
ATTAACCCCG GCTCAGATGC CGCTTCCTAT AGCCAGTTCA ATCTGTTTGT GTCTTACACC
GGCATCAAGA ACTGGACGCT GTATGCGGGC ATCAATAACC TGTTCAACCG CACCCCGCCG
TTTGACCCGG TATGGATGTA CACGTACCGC GGCGCCTATG ATCCGTCGCA GTACTCGGGC
ATCGGCCGCT ACGGTCAAAT CGCTGCAACT TATAGGTTCT GA
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| Protein sequence | MKQKALAVAI KKIVWAQLVL SAALAVPAFA QSQPVASEGP SSESALGSTP AITGQVVTPT
APASGTQTPK PATSTSGTEI TGPSDNKVAQ LKKFEVTGSL IRSSDKTGFN QVQTVTQKEM
LNSGATTVSD FLRGTSANSG SSWGEDTVLS QSPGGTGIAL RGMSEKYTLV LVDGQRAAPY
AFANGGTDTF FDVNTLPLNM IDRIEIVKTG AVSQYGSDAI AGVVNVITKK NFQGLQLDAS
AGGAQHGGEG TTSFSMLGGF GNLNSDRFHV TAALSHYRSS GVSMSQRDFA RNENYAALPG
GYFSQPSSFF MTPSGPQALS PCGPTGTVTS ALNNLQTKSD GTVCSQNGAS GQSLAAQTER
TSAKVHATFK VSDNVEAFGD IWGSHNTTSL MSGLAGFGAG ALVPSLYYTG SEFAAFAPTV
GGNALTYYFP KAQAVNTTSN FYRVSTGMKG SLSTTRFGDW DWAASYGHSQ SVVSNAYTNQ
VNASAVLGYT DSVTPATFSA ATLNGLPGVL GTSYNQGISK LDVVDATIST PNLFKLPAGD
VGIGLGAQFQ HQSEYIGPGS TAFVNPYTQA VDGNRNVAAL YYQADIPIVR GLTFGQSGRY
DRYNDFGGVY SPRFALRYQP VRDLTMYASY NRGFRAPTLI ELYQAAAVTY QTVNNQNVNE
YFVGNPSLQP ERTKNFNIGF QSSPTRTTDF GLDYYRIDVS NVIGQPNIVA MVNANPGQPM
YKLGYTNLSY LRTEGFEATF KQVVPTTIGT FTLAGDWAYV WHFTMPMSGV ATDFAGNNGA
NNTVFGGAFP RWKGTTELSW AYRKWTTTLT WKYTGPYTQV INPGSDAASY SQFNLFVSYT
GIKNWTLYAG INNLFNRTPP FDPVWMYTYR GAYDPSQYSG IGRYGQIAAT YRF
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