Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4692 |
Symbol | |
ID | 8017270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 24161 |
End bp | 24745 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644828384 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002979584 |
Protein GI | 241589559 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTTGC GCGTCTTCTG GCGCCTGATG GCCTGGCTAG CAGGCGGGCG CTTGCCGGCC ACACGTTTCG ACTTCGCCTT TGAAAGCCCG CCCCACGTCG ACAGCTACAG CAAAGTCTTT CCAGCACAAC TGCAGTTCGG GCAGCGGCAA ACGACGATAT GGTTCGATGT CGCGTGGCTG CAAAGCCCTG TGCGCCAGGA CGAAGCCGCG CTGCGCGCCT TCCTAGCCGA TGCGCAAGCC CACATCATCA TGCCTCGGCG TGGCAACGAC ACCATCAGCG CACGCGTGCG CAACCACCTG CAGCACATGC AGCCGGCATG GCCCGACCTT GCCACCACGG CCGATGCGCT ACACATGTCC ACCGCCACGC CGCAGCGGCG CCTTGCACTG GAGGGTGCAT CTTTCCAGTC ATTGAAGGAC GAGTTGCGGC GCGATATGGC CATCGTTCGT CTGTCGATGT CTTCCGTGCC GTTGGCAGAG TTGGCGCAGG ATCTTGGATT TACCGACAGT GCAGCATTTC AGCGCGCATT CAAGAGCTGG ACAGGCAGCG CGCCGGGGGT GTATCGCCGA GGCAAGCCGT CATAA
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Protein sequence | MLLRVFWRLM AWLAGGRLPA TRFDFAFESP PHVDSYSKVF PAQLQFGQRQ TTIWFDVAWL QSPVRQDEAA LRAFLADAQA HIIMPRRGND TISARVRNHL QHMQPAWPDL ATTADALHMS TATPQRRLAL EGASFQSLKD ELRRDMAIVR LSMSSVPLAE LAQDLGFTDS AAFQRAFKSW TGSAPGVYRR GKPS
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