Gene Rpic12D_4692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4692 
Symbol 
ID8017270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp24161 
End bp24745 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content63% 
IMG OID644828384 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002979584 
Protein GI241589559 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTGC GCGTCTTCTG GCGCCTGATG GCCTGGCTAG CAGGCGGGCG CTTGCCGGCC 
ACACGTTTCG ACTTCGCCTT TGAAAGCCCG CCCCACGTCG ACAGCTACAG CAAAGTCTTT
CCAGCACAAC TGCAGTTCGG GCAGCGGCAA ACGACGATAT GGTTCGATGT CGCGTGGCTG
CAAAGCCCTG TGCGCCAGGA CGAAGCCGCG CTGCGCGCCT TCCTAGCCGA TGCGCAAGCC
CACATCATCA TGCCTCGGCG TGGCAACGAC ACCATCAGCG CACGCGTGCG CAACCACCTG
CAGCACATGC AGCCGGCATG GCCCGACCTT GCCACCACGG CCGATGCGCT ACACATGTCC
ACCGCCACGC CGCAGCGGCG CCTTGCACTG GAGGGTGCAT CTTTCCAGTC ATTGAAGGAC
GAGTTGCGGC GCGATATGGC CATCGTTCGT CTGTCGATGT CTTCCGTGCC GTTGGCAGAG
TTGGCGCAGG ATCTTGGATT TACCGACAGT GCAGCATTTC AGCGCGCATT CAAGAGCTGG
ACAGGCAGCG CGCCGGGGGT GTATCGCCGA GGCAAGCCGT CATAA
 
Protein sequence
MLLRVFWRLM AWLAGGRLPA TRFDFAFESP PHVDSYSKVF PAQLQFGQRQ TTIWFDVAWL 
QSPVRQDEAA LRAFLADAQA HIIMPRRGND TISARVRNHL QHMQPAWPDL ATTADALHMS
TATPQRRLAL EGASFQSLKD ELRRDMAIVR LSMSSVPLAE LAQDLGFTDS AAFQRAFKSW
TGSAPGVYRR GKPS