| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4676 |
|---|
| Symbol | |
|---|
| ID | 8017255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012855 |
|---|
| Strand | + |
|---|
| Start bp | 9977 |
|---|
| End bp | 10630 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644828369 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002979569 |
|---|
| Protein GI | 241589544 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACG ATTCGGGAAC TGTTGACGAC GGTGAGGAAA GAAAGCGGTT GTATGAGAAG
CGGCGAGAGG AGCTTTTTAA GCTTAGACTC TCAAATCTGG AGAATTTGGA CAAATCCATT
TTGACGTATT CCAGTGCAGG CCTTGCGCTC TCGCTCGGAT TTCTCAAGGA TTTCATTCCA
ATTTATCAAG CTAAGTTCGC TTGGGCTCTT TACGGATCGT GGATATGTTT CGCGTTCGCG
ATATCGCTGG TTGTTCTGTC CTATGTGGTT AGTGTCCAAA TTATTGTCAG GCAGCTTGAG
CAGGCGGAGC GGTACTATCT CTACAGAGAT GAAGGCGCGT ATTTTTCTGG TGGCTGGGCT
CACAGATTGG CGGATCATCT GAATTCTTGG CTGTCTGCTG CTGTGTTTGT TGTTGCATTA
ATATTGACAA TACTATTTGT TTCGCTGAAT TTAACTGGAG CAACCATGGT GAGCAAGAAG
ATCGTAAGTG CGTATGCCCA GGATGGTGCA ATCGGTACGG CAATGCAAAA AGTCCAATCA
GTCCAGAAAG GTGTAACGGG TATGCCGATG CAAACTGCTA CGCCTGTCAA GCCCGCTAGT
CCGGCACCAG CGCCCCAGTC ACAACCGAGC AACGCCACAA AGTCCGTCGG TTGA
|
|---|
| Protein sequence | MQNDSGTVDD GEERKRLYEK RREELFKLRL SNLENLDKSI LTYSSAGLAL SLGFLKDFIP
IYQAKFAWAL YGSWICFAFA ISLVVLSYVV SVQIIVRQLE QAERYYLYRD EGAYFSGGWA
HRLADHLNSW LSAAVFVVAL ILTILFVSLN LTGATMVSKK IVSAYAQDGA IGTAMQKVQS
VQKGVTGMPM QTATPVKPAS PAPAPQSQPS NATKSVG
|
|---|
| |