| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4653 |
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| Symbol | |
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| ID | 8022347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1311128 |
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| End bp | 1312000 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644833430 |
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| Product | aminotransferase class IV |
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| Protein accession | YP_002984564 |
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| Protein GI | 241666205 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0520595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGAA TCGTCTTCCT GAACGGCCAA TACGTGCCCG CCGCCGAAGC CACCGTTTCC
ATCATGGACC GCGGCTTCAC CTTTGCCGAT GGCATTTACG AAGTCACCGC CGTGGTGCGC
GGCAAGCTGG TCGATAACGA TGCCCACCTT GCGCGCCTGA CGCGCTCGCT GTCGGAGATC
GGCATCGACA ATCCGTACAC CGGAGCGCAA TGGACGCGTG TGTGCGAAGC GCTGGTGGCG
CGCAATGCCC TGGAAGAGGG CGTTGTCTAC ATGCAGGTGA CGCGCGGGGT GGCCGAGCGC
GACTTTGGCA TTCCAGCAGA CATGACGCCC ACCGCAGTGG CCTTCACGCA AGTCAAGACC
ATCGTTGACA ATCCGCTGGC GCGCAAAGGT GCGACCGTCA TCACCGTGCC CGACCTGCGC
TGGAAGCGTT GCGACATCAA GAGCGTTGGC CTGCTTCCGC AGGTGATGGC CAAGCAGATG
GGGGCCCGCG CCGGCGCGCA CGAAGCGTGG ATGACCGACG GCGATCGCGT GACGGAAGGC
GCGTCGTCCA CGGCGTTCAT CATCACCGCA GACAAGCGGC TGATCACGCG TCCGCTGTCG
AACGCCGTGC TGCCGGGCAT CACGCGCGTG TCGGTCATGG CCCTGGCGCG TGAGCATGGT
CTCACGCTGG AAGAGCGGAC GTTTTCCATC CAGGAGGCTC AGCAGGCGGC GGAGGCGTTC
TACACGAGTG CATCGACGTT CGTGATGCCG GTGGCGTCCA TCGACGGCGT GACGATTGGC
AATGGGCAGC CGGGCCCGCT GACGCAGGCG CTGCGCGGGC TGTATCTGAA GTTTGCTGGT
GCGGATGCAG CGGAGACCTC CGATCAGATG TGA
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| Protein sequence | MSRIVFLNGQ YVPAAEATVS IMDRGFTFAD GIYEVTAVVR GKLVDNDAHL ARLTRSLSEI
GIDNPYTGAQ WTRVCEALVA RNALEEGVVY MQVTRGVAER DFGIPADMTP TAVAFTQVKT
IVDNPLARKG ATVITVPDLR WKRCDIKSVG LLPQVMAKQM GARAGAHEAW MTDGDRVTEG
ASSTAFIITA DKRLITRPLS NAVLPGITRV SVMALAREHG LTLEERTFSI QEAQQAAEAF
YTSASTFVMP VASIDGVTIG NGQPGPLTQA LRGLYLKFAG ADAAETSDQM
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