| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4499 |
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| Symbol | |
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| ID | 8022187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1133075 |
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| End bp | 1134250 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644833273 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002984413 |
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| Protein GI | 241666054 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.345717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0635316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTG GTGGCCTGCG AAAGACGCTC GCACTTGCAA GTGCTGCGCT GGCGCTGGCA
TTGGCGCTCA CGTACGCACT CTGGCCGGTA CCTGCGGCCG TGGACACAGG GCGTGTCACC
CGTGGGCCGC TTCAAGTCAC GATCGATGAA GACGGCGAAA TCCGTGCGCA TGATCGTTAC
GTCATCACTG CGCCCATCAC AGGCCGACTG CTTCGCGTTG AACTGCATGA AGGCGATCAG
ATTAAGGCAG GGCAGGTGAT CGCCGTTCTG GTGCCGGTGC CGATGACTCC GGGAGAACGA
GCTGCCCAAC GCGCACGTGT TGATGCGGCA GAGGCAATTT TCAGTGAGGC CCAGGCGCGG
GCCGCGCATG CGCGGGCAGA CTACGACCAA GCGCGCCGAA ACTTGGACCG GGGCGAAACG
CTTTTGAGCA GCGGTGCCAT GTCCAGGCAG GAAGTGGAGC AGATGCGGAC CATGGCTGCC
TCAAGTGCCA GCGATCTGAC AGCAGCACGC GCAAGAGAAA CGTCCGCCGC CGCCGACGTT
CGTGTCGCCA TGGCAAATTT GAAGGCGTTG GAAGCCGGGC AACCCGTTGA AGTTCGTGCC
CCGACCAATA CCGTTCTGTT GCGCATCGAG CAACAAAGTG AGCGCGTGGT GCTTGCAGGC
GCGGCCTTGA TGCTTCTGGC CGACCCATCG CGCTACGAAC TCGTCGTCGA CGTGCTATCG
ACCGATGCGG TCAAGATCAG TCCGGGCATG CGCGTATCGG TAGTGGAGTG GGGCGGTCCG
TGGGCCGTCA ACGCCACGGT CCGGACAGTA GGTCCAGGGG CGTTTACCAA GGTGTCGGCG
CTCGGGGTTG AAGAACAGCG CGTCCATATT GTGGCGGATC TTGTCGACCC GCCAGGCAGG
TTGAATGATG GGTACCGCGT ACAAGGCCGC ATCGTCATCT GGGAACAACC CGACGTACTG
AAGCTGCCGA TTGGCGCGTT ATTCCGCTGC GGCGGTAACT GGTGCACGTT TATCGTTAAG
AACGGAAAAG CTGTACAGCG AATCATTCAG ATCGGACAGC GCAACGCGGA GGAAGCCCAG
GTGCTCGATG GGCTTCAGGA CCACGACACC GTGGTCGTCT ATCCTCCGAC CACGCTCAGT
GACAGCATGA GCGTGCGCCC CCTGAACGCC CGCTGA
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| Protein sequence | MKRGGLRKTL ALASAALALA LALTYALWPV PAAVDTGRVT RGPLQVTIDE DGEIRAHDRY
VITAPITGRL LRVELHEGDQ IKAGQVIAVL VPVPMTPGER AAQRARVDAA EAIFSEAQAR
AAHARADYDQ ARRNLDRGET LLSSGAMSRQ EVEQMRTMAA SSASDLTAAR ARETSAAADV
RVAMANLKAL EAGQPVEVRA PTNTVLLRIE QQSERVVLAG AALMLLADPS RYELVVDVLS
TDAVKISPGM RVSVVEWGGP WAVNATVRTV GPGAFTKVSA LGVEEQRVHI VADLVDPPGR
LNDGYRVQGR IVIWEQPDVL KLPIGALFRC GGNWCTFIVK NGKAVQRIIQ IGQRNAEEAQ
VLDGLQDHDT VVVYPPTTLS DSMSVRPLNA R
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