| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4454 |
|---|
| Symbol | |
|---|
| ID | 8022142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 1092988 |
|---|
| End bp | 1093677 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644833228 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002984368 |
|---|
| Protein GI | 241666009 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.327935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0437667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCAA AATATTATCT TTATTGCCTC GCTGATTTCA CCTTGATCAC GACGTCGTTA
ATCTATGGGA TCAAGCTTCT CAAGAAGCGA AACTTCCTGC TCGGGTTCGA GTGGCTGGTT
GTGACATTCT CGGCGACGAA CTTATTGACC AACGCATTAA CCGGAGAGCA GGTTTTCCTG
AGCATCTCGC TTTTTTGCGA TGCGTTTTCC AGAACCGTCG GTGTACCGGT GATCGCGGTC
GCCGGCATGA TGGCCGTTAC GCATCGATAC AAGCCGTCGA CTGGTGCGGA TGTCATGTAT
GTGGTGGGCG GATTGGCGGC AACCGTCGTC GTATGGACAG CAGATTTCAT GGTGGGGCCA
AAGCCTTACT TCTATCTGGT GATGTGGTCT TTGTTCTCGG TTTACGTCGC TTACGTGATC
AAGAAATTGC TAAGCGCCGG AGAGAAGCGG ATCGCTTTCG GCGTGATCCT GGCGTTGGTA
TCCGCACAGA CGATTGCCAG CATCTATGAC TTCTACCATA TACCGGGTGA CGATGATCAC
GCGGTCTTCT ATACGATTGC GATGCTTGTC TGGGCTTATC AGTCTGTGGT GTTTTATTAC
GCCTATTGCG CCTTGGAGCG CGCGCAGACA CAGGAATGGA GCCTGAATCG GGGTTATGCC
CTTGGCGGCC TGGAACGGAC TTCGCAGTGA
|
|---|
| Protein sequence | MEPKYYLYCL ADFTLITTSL IYGIKLLKKR NFLLGFEWLV VTFSATNLLT NALTGEQVFL
SISLFCDAFS RTVGVPVIAV AGMMAVTHRY KPSTGADVMY VVGGLAATVV VWTADFMVGP
KPYFYLVMWS LFSVYVAYVI KKLLSAGEKR IAFGVILALV SAQTIASIYD FYHIPGDDDH
AVFYTIAMLV WAYQSVVFYY AYCALERAQT QEWSLNRGYA LGGLERTSQ
|
|---|
| |