| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4346 |
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| Symbol | |
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| ID | 8022034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 965351 |
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| End bp | 966778 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644833121 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002984261 |
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| Protein GI | 241665902 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.647475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.664063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGAGC CGTTCATCGC TCACCTGGTC AATACGCTGG CGCACGCGTT GTTGCCTGCG
TTGCTGCCGT TTGTCGTGGC CTGCGGCGCG GGCAGTCTGC TGCTGCGTCT GCTTGATGAC
TTGCGCAGTG CGACGGCCCC GCGCACGCGC GTGCCGCTGG TCATGACAGC GTTGTTCTCG
GCGGTCGGGC TGTGGGCAGT GCCGCTGCTG CCGCTGCTTG CGCATTGGCC GCTGCACGAA
GGTCCCGCGG TGCTTGTGAT GACGCTCGCG TCGTTCTGCT GGAGCCTGGC CGTGGCGGCG
CTGTGGTGTG TGCTGGGCGG CCGTGCGGGC CTGATGCGCG CCCTGTTGCT CGGCGTGTTG
CTGAGCGTAA GCGGCCCCGT GGCGGTGTTG CTGCTGGCGG GTGTGACCAG CTTCAGCGCC
ACCGCCTGGG AAGACGCCGG GCTGCTCGGT ATCGTCATGG CTCTGTCGGC GATGGCGTGT
GCTGCGGCGC TGCAATTTGC GCTCTCGGCG CGGTCGGGGG CGACCGGGGT AGCGGTACGC
CGTCCGGGCG TGAGTCTGTT TGTCAGCGTG CTGTTTGGCG TTGCGTTGAC GGCGGATGCG
GTGTACACGG CGTCGCTCGC AGGCTCGTTT TCGACGCTTT CCGACATGCC CGGCAATGCG
CCGGCAGGGT TGCGGTTGCT GCTCGTGATG GGCGCGGCTG CAACAGCGCT CGCTGCTTTG
CTGCTGGGCT ATCGGGATCG TGCAACAGGC GACACCGCCG CCGCCGTTGC CACACGCGAA
ATCCGTCTGC GCAAGGAGAC CGTGCAGGCG CTCAACGACC TGGAGCAGAG CTACCGCCGC
CGCGAGGCCG AACTTGTTGC CCGCCATCAA CTGCTGCTCG ACGGCGCAGA TGTCGGTCTG
TGGGAGTTCG ATCTGGTCAC CCGCGCTGCG CAGTTCTCCG CGCGCTTTGC CGCCATGCTG
GGCTACACGC TCAAGGAGAT CGGCCCAAGC ACGAGCGAGT ATCTCCGTCT GGTGTACCCG
GATGATCTGC CCATGGTGCT CAATCGCATC CAGGCGCATG TTGACGGCAA TACGCCGGCT
TACGTGGCGG AATTCCGCAT GCGGCACAAG GACGGCAGCT ATCGCCAGAT TGCCGCGCAC
GGCGTGGCAG TGCGCGACGC CGGTGGCAAT GCCGTGCGCA TGGCAGGGTC GCATATCGAG
GTGGCTGCAA AAGCAGCCTC GGCGGGGGTT GCCGGCTCAG CCGCTTCGAT CGTTGCCGAG
GCACCGGAAA CGCTGCGTCG CCATGGCTTG TGGGAATCCT GGTCGCCTGC CGATCATCCC
GCCGCAGAAG CTGTCGCACC GCAGACAGAA TCGACATCAC TGCCTGGGCC CACTACGACG
TCCACAGGCG GCGCGCTTCC CAGCATCAAT CCCGACGCCT TGCGTTGA
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| Protein sequence | MDEPFIAHLV NTLAHALLPA LLPFVVACGA GSLLLRLLDD LRSATAPRTR VPLVMTALFS
AVGLWAVPLL PLLAHWPLHE GPAVLVMTLA SFCWSLAVAA LWCVLGGRAG LMRALLLGVL
LSVSGPVAVL LLAGVTSFSA TAWEDAGLLG IVMALSAMAC AAALQFALSA RSGATGVAVR
RPGVSLFVSV LFGVALTADA VYTASLAGSF STLSDMPGNA PAGLRLLLVM GAAATALAAL
LLGYRDRATG DTAAAVATRE IRLRKETVQA LNDLEQSYRR REAELVARHQ LLLDGADVGL
WEFDLVTRAA QFSARFAAML GYTLKEIGPS TSEYLRLVYP DDLPMVLNRI QAHVDGNTPA
YVAEFRMRHK DGSYRQIAAH GVAVRDAGGN AVRMAGSHIE VAAKAASAGV AGSAASIVAE
APETLRRHGL WESWSPADHP AAEAVAPQTE STSLPGPTTT STGGALPSIN PDALR
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